Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 90.5 bits (223), Expect = 5e-23
 Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 8/176 (4%)

Query: 141 IHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIAPETL----LGLIIFDIDHFKQIN 196
           +H  ++ L E +R +  D LT+L NRR F      +   ++      L++ DIDHFK+IN
Sbjct: 162 MHQVRLELDEYKRIANTDSLTRLSNRRAFDDRLASVYDSSIGLQYTTLVLLDIDHFKRIN 221

Query: 197 DTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYV 256
           DT+GHP GD +L  +A ++  N+       R GGEEF +  + +    V+ + E IR  +
Sbjct: 222 DTFGHPVGDKILATVASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVMCERIRLSL 281

Query: 257 ES---HTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVI 309
           ES              +T+S G    A  S N   L   AD AL  AK  GRNR +
Sbjct: 282 ESTPFRNSRSGADYGTVTISIGFASAARAS-NPSELYGHADTALYHAKETGRNRSV 336