Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 72/197 (36%), Positives = 97/197 (49%), Gaps = 24/197 (12%)

Query: 126 EPSCRDDLHIITFRNIHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIAP-----ET 180
           E  CR D +I T + +   +  LAE       D LT L NRR FF  +  +       + 
Sbjct: 233 ELQCRIDNNIETLKQLKRLR-ELAER------DHLTGLPNRRSFFERTRALMDVINDNDE 285

Query: 181 LLGLIIFDIDHFKQINDTYGHPAGDYVLRQIAGLL------EQNLPPLSCCVRWGGEEFL 234
              + I DIDHFK+INDT GH AGD  L+++A LL      ++++P      R GGEEF 
Sbjct: 286 SGAVAILDIDHFKKINDTLGHDAGDRALKKLAELLQGMCDEQRHIP-----ARLGGEEFA 340

Query: 235 VCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTAD 294
           V     D        E +R+ VE +     G  +ALT+S G  +       +DN L+ AD
Sbjct: 341 VFLRGLDARAAYAFCEELREQVEKNGRQLSGSSLALTISLG-VVEIEKGEPFDNQLNAAD 399

Query: 295 QALLSAKRLGRNRVIAD 311
           Q L  AK  GRNRV +D
Sbjct: 400 QLLYLAKANGRNRVYSD 416