Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ from Xanthobacter sp. DMC5

 Score = 42.0 bits (97), Expect = 8e-09
 Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 16/165 (9%)

Query: 4   IALYEPEIAPNTGNIIRLCANCG-ANLHLIEPL-GFDLEEKKVRRAGLD--------YHD 53
           I L EP++  N G+  R   N G + L ++ P  G+  +  +   AG D        + D
Sbjct: 19  IILVEPQLGDNIGSAARAMGNFGLSRLRIVNPRQGWPNDRARTFAAGADRILDEAQLFPD 78

Query: 54  LARVTRHKDYAAFIEYLQRERG-SFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPA 112
           L R   H    AF     RERG + R+      T +        +   L+FG E  GL  
Sbjct: 79  L-RAALHDVKFAFAT-TARERGMAKRVVGADEATAEARSRMAAGEEVALVFGRERTGLYT 136

Query: 113 ELIASLPAEQRIRIPMMPEARSLNLSNAVAIIAFEAWRQMGFDGA 157
           E ++   A   + +P+ P   SLNL+  VA+  +E W +    GA
Sbjct: 137 EEVSLCDAI--LTLPVNPAFASLNLATCVAVAGYE-WSKAESGGA 178