Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 151 a.a., rRNA methylase from Pseudomonas simiae WCS417

 Score =  186 bits (471), Expect = 2e-52
 Identities = 89/154 (57%), Positives = 114/154 (74%), Gaps = 4/154 (2%)

Query: 1   MFDIALYEPEIAPNTGNIIRLCANCGANLHLIEPLGFDLEEKKVRRAGLDYHDLARVTRH 60
           MF + L++PEI PNTGN+IRLCAN G +LHLIEPLGFD+++K++RRAGLDYH+ A + RH
Sbjct: 1   MFHVILFQPEIPPNTGNVIRLCANSGCHLHLIEPLGFDMDDKRLRRAGLDYHEYATLKRH 60

Query: 61  KDYAAFIEYLQRERGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPA 120
            D A+ +E L    G  RLFA TTK +Q   D  F +GD  LFGPE+RGLPAE++ +LP 
Sbjct: 61  ADLASCLESL----GHPRLFAFTTKGSQPFHDVSFAEGDAFLFGPESRGLPAEVLDALPD 116

Query: 121 EQRIRIPMMPEARSLNLSNAVAIIAFEAWRQMGF 154
             R+R+PM    RSLNLSN VA+  +E WRQ+GF
Sbjct: 117 GHRLRLPMREGCRSLNLSNTVAVAVYEGWRQLGF 150