Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200) from Variovorax sp. SCN45

 Score = 39.7 bits (91), Expect = 4e-08
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 12/154 (7%)

Query: 6   LYEPEIAPNTGNIIRLCANCG-ANLHLIEPLGFDL--EEKKVRRAG--LDYHDLARVTRH 60
           L +   A N G   R     G ++L L+ P   ++   E+ ++RA   LD    AR+   
Sbjct: 7   LIQTSHAGNVGAAARAMKTMGFSDLVLVAPRWANVLRREETIQRASGALDVLTNARIVET 66

Query: 61  KDYAAF-IEYLQRERGSFRLFACTTKTTQHHVDAQFQQGD---VLLFGPETRGLPAELIA 116
            D A   + +L       R F   T+T + H++   +QGD     LFG E  G+  E + 
Sbjct: 67  LDEALDGVTHLCATAMIPRDFGPPTRTPREHLEPLAKQGDQHVAFLFGSERFGMRNEDVY 126

Query: 117 SLPAEQRIRIPMMPEARSLNLSNAVAIIAFEAWR 150
                  + IP  P+  SLNL  A+ ++A+E WR
Sbjct: 127 R--CNVALTIPTDPKFGSLNLGAAIQVVAYE-WR 157