Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., RNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 4   IALYEPEIAPNTGNIIRLCANCG-ANLHLIEPLGFDLEEKKVRRA-GLDYHDLARVT--R 59
           I L  P+++ N G   R   NCG  ++ ++ P    L EK +  A G D   L+     +
Sbjct: 13  IILVRPQLSENIGTAARAMLNCGLTDMRIVAPREGWLSEKAIAAASGADRLLLSAKVFEQ 72

Query: 60  HKDYAAFIEYLQRERGSFRLFACTTKTTQH---HVDAQFQQGDV--LLFGPETRGLPAEL 114
            KD  A +  +    G  R       T +    H+ A   +G    +LFGPE  GL  + 
Sbjct: 73  TKDAVADLNRVWATTGRDRYMTKPVDTPREAAAHMRAAHAEGQTFGVLFGPERTGLENDD 132

Query: 115 IASLPAEQRIRIPMMPEARSLNLSNAVAIIAFEAWRQ 151
           +A   A+  + +P+ PE  SLNL+ AV ++++E W Q
Sbjct: 133 VAV--ADTVLTVPLNPEYCSLNLAQAVLLVSYE-WHQ 166