Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Bacteroides stercoris CC31F

 Score = 39.3 bits (90), Expect = 5e-08
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 14  NTGNIIRLCANCGANLHLIEPL--GFDLEEKKVRRAGLDYHDLARVTRHKDYAAFIEYLQ 71
           N G I R C  C A   +I P      +    V+ +    H L  V R ++    +++L+
Sbjct: 110 NFGAIARTC-ECAAVDAVIIPAKNSVTVNADAVKTSAGALHTLP-VCREQNLKDTLQFLK 167

Query: 72  RERGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPAEQRIRIPMMPE 131
                F + A T K    +  A +     ++ G E +G+  + +A    ++ ++IPM+  
Sbjct: 168 SS--GFHIVAATEKGDYDYTKADYTGPMCIIMGAEDKGVSYDNLAL--CDEWVKIPMLGT 223

Query: 132 ARSLNLSNAVAIIAFEAWRQ 151
             SLN+S A  I+ +EA +Q
Sbjct: 224 IESLNVSVAAGILIYEAVKQ 243