Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., two-component sensor protein (NCBI) from Escherichia coli BW25113

 Score =  355 bits (911), Expect = e-102
 Identities = 205/456 (44%), Positives = 268/456 (58%), Gaps = 6/456 (1%)

Query: 8   LNNLYGRIFAIFWFTMLLVLFAVLTLPHLDPRKSRDLSPETHQRLLESRDRFEQQFRNQS 67
           + +L  RIFAIFW T+ LVL  VL LP LD R+  +L     ++ L      E +  N  
Sbjct: 2   IGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDP 61

Query: 68  DLRAILFQLEGPDSQHRKHDGQPRFFITDLESNIITNSKQTDFRFKAMQNFCSSIESVQK 127
               + ++            GQ R  +   E  +I   +      + ++NF    ++   
Sbjct: 62  PNDLMWWRRLFRAIDKWAPPGQ-RLLLVTTEGRVIGAERS---EMQIIRNFIGQADNADH 117

Query: 128 PQQRLYGRYMLAGPVPITLAKQDLLLY-VGMRWDEPPPFLLRLFDKPFQLLLAIMLVSTP 186
           PQ++ YGR  L GP  +   + +  LY +         F+  LFD+P  LL+  MLVSTP
Sbjct: 118 PQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTP 177

Query: 187 LLLWLAWALSKPAQNLAQAAQRVARGEFVHDPKLERGTAEFQQAGRSFNQMVDAVNQMVS 246
           LLLWLAW+L+KPA+ L  AA  VA+G     P+LE G  EF  AG SFNQMV A+ +M++
Sbjct: 178 LLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMT 237

Query: 247 GQQRLLSDISHELRSPLTRLRMANALAMRKLGSSSELERIDTEAQRLEQMIGDLLALSRM 306
            QQRLLSDISHELR+PLTRL++  AL  R+ G S ELERI+TEAQRL+ MI DLL +SR 
Sbjct: 238 SQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRN 297

Query: 307 QINSHLMREVQPLSSLWEELLKDAQFEAEQMHKMLTFDAIP-ERTINGTPKLLMSALENV 365
           Q  + L+ E    + LW E+L +A FEAEQM K LT +  P    + G P  L SALEN+
Sbjct: 298 QQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENI 357

Query: 366 VRNAIHYGQQQIHVAFTIQDQQLIVSVDDDGEGVPEEELADIFRPFYRVSTARDRHSGGT 425
           VRNA+ Y   +I V F +    + ++VDDDG GV  E+   IFRPFYR   ARDR SGGT
Sbjct: 358 VRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGT 417

Query: 426 GLGLAITENAIRQHSGTISANRSHLGGLQVRFTLPL 461
           GLGLAI E AI+QH G + A  S LGGL++   LPL
Sbjct: 418 GLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPL 453