Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  158 bits (400), Expect = 8e-44
 Identities = 89/230 (38%), Positives = 138/230 (60%), Gaps = 7/230 (3%)

Query: 3   HILLIDDDTELTSLLTEVLQYEGFEISQANDG-EAGLAAVSDEIDLILLDVMMPKLNGME 61
           HIL++DDD E+  L  + L+  G +++ A    E   A  +  +DL++LD+M+P ++G++
Sbjct: 10  HILIVDDDAEIRRLAGKFLREHGHKVTAAQGAREMREAMAAGTVDLVILDIMLPGVSGLD 69

Query: 62  TLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNG 121
             + +R     P++MLTA+G ++DR++GLELGADDYL KPF+ RELLARI A+LRRT+  
Sbjct: 70  LCRDIRRTSNVPIIMLTARGSDVDRIVGLELGADDYLAKPFNPRELLARIHAVLRRTRLS 129

Query: 122 LTPKNSDVIECQDIQVYP----GKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEML 177
             P   +   C     +      ++    +G +++L+T E+ LL  F++ P   LT++ L
Sbjct: 130 -DPAAVNGGTCLTFSGWTLDTRRRELTNPEGAIVDLSTGEYDLLLTFLEHPQRVLTRDQL 188

Query: 178 SIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227
                 +    FDRAID+ VS LR+KL E   G   +KT+RG GY  V E
Sbjct: 189 MDAAKNRIATGFDRAIDIQVSRLRRKL-ESHGGPEMVKTVRGTGYFFVPE 237