Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  154 bits (389), Expect = 1e-42
 Identities = 91/225 (40%), Positives = 131/225 (58%), Gaps = 4/225 (1%)

Query: 3   HILLIDDDTELTSLLTEVLQYEGFEISQANDG-EAGLAAVSDEIDLILLDVMMPKLNGME 61
           HIL++DD  E+  LL + L   GF +S A+ G +      +   DL++LD+MMP  +G+ 
Sbjct: 6   HILVVDDHREIRELLAKYLTRNGFRVSVASGGVDMRQQMRTGTFDLVVLDIMMPGEDGLT 65

Query: 62  TLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNG 121
             ++LR+    PV++LTA  EE DR++GLELGADDY+ KPF+ RELLARIRAILRR Q  
Sbjct: 66  LCRQLRQASDIPVVLLTAVAEETDRIVGLELGADDYVTKPFNPRELLARIRAILRRAQGP 125

Query: 122 LTPKNSD--VIECQDIQVYPGKQEAYCQ-GQLLELTTTEFALLTHFVQSPGATLTKEMLS 178
              +  D  +      Q+ PG++    + G  + L + EF LL  FV  P   L+++ L 
Sbjct: 126 TRAQQGDPALYRFDRWQLDPGRRVLLDETGSEVRLGSAEFRLLLAFVTRPSVVLSRDQLL 185

Query: 179 IEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
               G+    FDR+ID  VS LR+++   P     IKT+ G GY+
Sbjct: 186 DITAGRPAQVFDRSIDNLVSRLRRRIERDPQNPTLIKTVWGDGYV 230