Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  160 bits (405), Expect = 2e-44
 Identities = 90/229 (39%), Positives = 138/229 (60%), Gaps = 5/229 (2%)

Query: 3   HILLIDDDTELTSLLTEVLQYEGFEISQANDG-EAGLAAVSDEIDLILLDVMMPKLNGME 61
           HIL++DDD E+  L  + L+  G +++ A D  E   A  S  +DLI+LD+M+P ++G++
Sbjct: 6   HILIVDDDAEIRRLAGKFLREHGHKVTSAQDAREMREAMASGPVDLIILDIMLPGVSGLD 65

Query: 62  TLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ-- 119
             + LR     P++MLTA+G ++DR++GLELGADDYL KPF+ RELLARI A+LRRT+  
Sbjct: 66  LCRDLRRSSNVPIIMLTARGSDVDRIVGLELGADDYLAKPFNPRELLARIHAVLRRTRPS 125

Query: 120 NGLTPKNSDVIECQDIQVYPGKQE-AYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLS 178
           + +       ++     +   ++E    +G +++L+T E+ LL  F++ P   L ++ L 
Sbjct: 126 DAVPTVGGSNLKFSGWTLDTRRRELTNPEGAVVDLSTGEYDLLLTFLEHPQRVLNRDQLM 185

Query: 179 IEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227
                +    FDRAID+ VS LRKKL E       +KT+RG GY    E
Sbjct: 186 DAAKNRTATGFDRAIDIQVSRLRKKL-ESHGSPEMVKTVRGAGYFFAPE 233