Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  152 bits (384), Expect = 6e-42
 Identities = 93/231 (40%), Positives = 136/231 (58%), Gaps = 12/231 (5%)

Query: 3   HILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAV-SDEIDLILLDVMMPKLNGME 61
           HI+++DDD E+  L+   L+  G   + A DG    A + S  +DLI+LD+MMP  +G+ 
Sbjct: 6   HIMIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDGLV 65

Query: 62  TLKRLR--EKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119
             + LR  +  ATP+LMLTA+ +E DR+IGLE+GADDYL KPF+ RELLARI A+LRRT+
Sbjct: 66  LCRELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTR 125

Query: 120 NGLTPKNSDVIECQDIQVY-------PGKQEAYCQGQLLELTTTEFALLTHFVQSPGATL 172
           +   P N  V E   +  +         +     QG ++ L+  E+ LL  FV  P   L
Sbjct: 126 S--LPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRVL 183

Query: 173 TKEMLSIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
           +++ L     G+    FDR+ID+ VS LR++L +     A +KT+R  GY+
Sbjct: 184 SRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYV 234