Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  149 bits (376), Expect = 5e-41
 Identities = 88/220 (40%), Positives = 130/220 (59%), Gaps = 1/220 (0%)

Query: 5   LLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSDE-IDLILLDVMMPKLNGMETL 63
           L++DDD  +  LL + L   G   +   DG A   A+  E  D+++LD+M+P  +G+   
Sbjct: 28  LIVDDDVPIRELLIDYLARFGILATGVTDGTAMRQAMQAETFDVVVLDLMLPGEDGLSLC 87

Query: 64  KRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNGLT 123
           + LR +   P+LMLTA+ E  DR+IGLELGADDY+ KPF  REL+ARI+ ILRR ++  T
Sbjct: 88  RWLRAESDIPILMLTARCEPTDRIIGLELGADDYMSKPFEPRELVARIQTILRRVRDDRT 147

Query: 124 PKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSIEVLG 183
            + +++           +Q     G ++ L+  EF LL  F++ P   L++E L     G
Sbjct: 148 EQRANIRFDNWRLNSVLRQLVADNGLVVPLSNAEFRLLWVFIERPRRVLSREQLLDAARG 207

Query: 184 KHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
           + + AFDR+ID+ VS LR+KL + P     IKT+RG GYL
Sbjct: 208 RSIEAFDRSIDLLVSRLRQKLGDDPKAPHLIKTVRGEGYL 247