Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  157 bits (397), Expect = 2e-43
 Identities = 85/231 (36%), Positives = 136/231 (58%), Gaps = 8/231 (3%)

Query: 3   HILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAV-SDEIDLILLDVMMPKLNGME 61
           HI+++DD+ ++T LL   L   GF ++Q +DG A +A + +D  DL+LLD+ +P  +G  
Sbjct: 6   HIVVLDDEIDITQLLANYLHGHGFRVTQVHDGRALMALMETDPADLVLLDLGLPGEDGFS 65

Query: 62  TLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNG 121
             +R+RE+W   ++++T +G+ +D+V+GLE+GADDY+ KPF  REL+AR++A+LRR    
Sbjct: 66  IARRMRERWHCGLVIVTGRGDAVDKVVGLEVGADDYVTKPFDLRELVARVKAVLRRLAPA 125

Query: 122 LTPKNSDVIECQDIQVYPGKQEAYC-------QGQLLELTTTEFALLTHFVQSPGATLTK 174
                +      D   + G Q            G+ + LT  EF LL  F + PG  L++
Sbjct: 126 TPVPPASAGAFADRLRFAGWQLDTAARSLLNPSGEPVTLTGGEFDLLQAFARHPGRVLSR 185

Query: 175 EMLSIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMV 225
           + L  +  G+  A FDR ID+ V  LRKK+    +    IK++RG GY++V
Sbjct: 186 DFLLEQTRGREAAPFDRTIDVQVGRLRKKIEADAEDPQLIKSVRGAGYILV 236