Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Two-component transcriptional response regulator, OmpR family from Sphingobium sp. HT1-2

 Score =  155 bits (393), Expect = 5e-43
 Identities = 89/226 (39%), Positives = 139/226 (61%), Gaps = 6/226 (2%)

Query: 4   ILLIDDDTELTSLLTEVLQYEGFEI-SQANDGEAGLAAVSDEIDLILLDVMMPKLNGMET 62
           + +++DD  +  L+  +L  EGFE+ +  N     +  V + +D ++LD+M+P  +G+E 
Sbjct: 33  VAIVEDDPGIRDLVRMLLTREGFEVLAMENSASLDVDGVLERLDCLILDLMLPGEDGLEI 92

Query: 63  LKRLREKWAT-PVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQN- 120
            +RLR +W   P+L++TAK + IDR+IGLE+GADDYL KPF+ RELLAR+R+I+RRT++ 
Sbjct: 93  CQRLRARWPRLPILIVTAKDDPIDRIIGLEIGADDYLAKPFNKRELLARLRSIIRRTRDI 152

Query: 121 --GLTPKNSDVIECQDIQVYPGKQE-AYCQGQLLELTTTEFALLTHFVQSPGATLTKEML 177
               + +N D        +  G ++     G+ + LTT+EF LL   V  P   L++E+L
Sbjct: 153 DTAASEENGDNFRFDGWLLRLGARDLTNPAGEPVGLTTSEFDLLHALVMHPRRILSRELL 212

Query: 178 SIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
                G H +  DR ID+ +S LR+KL + P   A I+T+RG GYL
Sbjct: 213 IDWTRGGHASPVDRVIDVQMSRLRRKLGDDPREPAMIRTVRGDGYL 258