Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 4e-50
 Identities = 101/224 (45%), Positives = 142/224 (63%), Gaps = 5/224 (2%)

Query: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSDEIDL-ILLDVMMPKLNG 59
           M+ +LLIDDD EL  LL   L  EGF +   +DG++   A+++     ++LDVM+P  +G
Sbjct: 1   MSELLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPAAVVLDVMLPDGSG 60

Query: 60  METLKRLREKWAT-PVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRT 118
           +E LK+LR + A  PVLML+A+GE +DR++GLELGADDYL KP   REL AR+RA+LRR+
Sbjct: 61  LELLKQLRSEHAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRRS 120

Query: 119 QNGLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLS 178
               T      +E  D+   P +  A   G+ + LT +E  +L   ++ PG  L K+ L+
Sbjct: 121 HPTATTSQ---MELGDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQELA 177

Query: 179 IEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGY 222
              LG+ L  +DR++DMHVSNLRKK+    DG+ RI  LR RGY
Sbjct: 178 QIGLGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIVALRSRGY 221