Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  162 bits (409), Expect = 7e-45
 Identities = 99/235 (42%), Positives = 139/235 (59%), Gaps = 14/235 (5%)

Query: 3   HILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSDE--IDLILLDVMMPKLNGM 60
           HIL++DDD E+  LLT+ +   G  +S A DG   +A V DE  IDL++LD+M+P  +G+
Sbjct: 7   HILVVDDDREIRDLLTKFMMRHGLRVSAAKDG-IEMARVLDERRIDLVVLDLMLPGEDGL 65

Query: 61  ETLKRLREKWA-TPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119
              +RLRE  A  P++MLTA GE+ DR++GLE+GADDY+ KPF+ RELLARI+A+LRRTQ
Sbjct: 66  SLCRRLRETRAGLPIIMLTAMGEDTDRIVGLEMGADDYVAKPFNPRELLARIKAVLRRTQ 125

Query: 120 NG--LTPKNSDVIEC-----QDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATL 172
                  K      C      D+     +      G ++ L+  EF LL  FV+ P   L
Sbjct: 126 TAEEAPAKRGGAKACFLGWTLDLAT---RDLHSPDGVMVALSAGEFGLLQVFVEHPRRVL 182

Query: 173 TKEMLSIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227
           +++ L     G+    FDR+ID+ VS LRK++ +       IKT+RG GYL   E
Sbjct: 183 SRDQLLDFARGRSAVPFDRSIDIQVSRLRKRIGDDARDPQIIKTVRGGGYLFTPE 237