Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., Response regulator ArlR from Alteromonas macleodii MIT1002

 Score =  200 bits (509), Expect = 2e-56
 Identities = 115/227 (50%), Positives = 157/227 (69%), Gaps = 8/227 (3%)

Query: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLA-AVSDE-IDLILLDVMMPKLNGME 61
           IL+IDDD ELT +L+  L   G+++   NDGE GL+ AVS    DLILLDVMMPK++G +
Sbjct: 25  ILVIDDDLELTEMLSTYLSSMGYQVQVCNDGEEGLSEAVSGRHYDLILLDVMMPKMDGFD 84

Query: 62  TLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNG 121
            LK+LR   +TPVLMLTA+G++ DR++GLE+GADDYLPKPF+ REL+ARI+AI+RR  + 
Sbjct: 85  VLKKLRVSHSTPVLMLTARGDDYDRILGLEMGADDYLPKPFNHRELVARIKAIVRR--HN 142

Query: 122 LTPKNSDV---IECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLS 178
           L+     V   +    I + P  Q A      L LTTTEF +L   + +    +TKE +S
Sbjct: 143 LSSTGGAVEQDLFVNGIFLSPSSQLAKVDDVELTLTTTEFLILRLLMLNAAQRVTKEEIS 202

Query: 179 IEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMV 225
           +++LGK L AFDR+IDMHVSNLRKK+      + +IKT+RG GY+++
Sbjct: 203 LKILGKPLQAFDRSIDMHVSNLRKKISAVAVDE-KIKTIRGVGYMLI 248