Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., Transcriptional regulatory protein OmpR from Acinetobacter radioresistens SK82

 Score =  149 bits (375), Expect = 6e-41
 Identities = 90/229 (39%), Positives = 133/229 (58%), Gaps = 5/229 (2%)

Query: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSDEI-DLILLDVMMPKLNGMET 62
           IL++DDD  L +LL   L+ +GF +  A+D       +  E+  LI+LD M+P  +G+  
Sbjct: 23  ILVVDDDVRLRTLLQRFLEDKGFVVKTAHDATQMDRLLQRELFSLIVLDFMLPVEDGLSI 82

Query: 63  LKRLREKWAT-PVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQN- 120
            +RLR+     P++MLTA+G + DR+ GLE GADDYLPKPF+  ELLARIRA+LRR    
Sbjct: 83  CRRLRQSNIDIPIIMLTARGSDSDRIAGLEAGADDYLPKPFNPNELLARIRAVLRRQVRE 142

Query: 121 --GLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLS 178
             G   +  +V+      +    +    +GQ++ LTT EFA+L   VQ P   LT++ L 
Sbjct: 143 VPGAPSQQVEVVSFGPWSLDLSTRTLTREGQVVTLTTGEFAVLKALVQHPREPLTRDKLM 202

Query: 179 IEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227
               G+   A +R+ID+ VS LR+ + E P     I+T+ G GY+ V +
Sbjct: 203 NLARGREWGAMERSIDVQVSRLRRLIEENPARARYIQTVWGVGYVFVPD 251