Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1196 a.a., transcription-repair coupling factor from Rhodanobacter sp000427505 FW510-R12

 Score = 57.0 bits (136), Expect = 6e-12
 Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 25/209 (11%)

Query: 225 GVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF---NVPVEVMHSAL 281
           G  G GKTEV L         G+Q  VLVP   L  Q    F  RF    V V+V+    
Sbjct: 676 GDVGFGKTEVALRAAFATATAGKQVAVLVPTTLLAQQHYRNFADRFADWPVRVDVLSRFK 735

Query: 282 NDTERLNAWLAARDKVAGIVIGTRSALLTP---FAKLGIIIVDEEHDSSYKQQDSLRYHA 338
           +  E   A     D    +++GT   LL P   F  LG++IVDEE     +Q++ L+   
Sbjct: 736 SAKEVNEALKRLADGQIDVIVGTHK-LLQPDVKFRNLGLVIVDEEQRFGVRQKEQLK--- 791

Query: 339 RDVAVMRAHLENIPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGL 398
                +RA ++   ++  +ATP   TL+ A++G         R  + + T          
Sbjct: 792 ----KLRAEVD---LLTMTATPIPRTLNMAMAG--------LRDLSLIATPPEHRSAVRT 836

Query: 399 YLESGLSAPLIAEMRRHLSAGNQVMLFLN 427
           ++ +   A +   ++R LS G QV    N
Sbjct: 837 FISAWDPATIREALQRELSRGGQVYFLHN 865