Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., primosomal protein N' from Rhodanobacter sp000427505 FW510-R12

 Score =  603 bits (1556), Expect = e-177
 Identities = 337/733 (45%), Positives = 448/733 (61%), Gaps = 13/733 (1%)

Query: 3   PSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLK 62
           P++ RV LPVPL   FDYL PA     +G RV VPFGR  LVG+V ++  ++     +LK
Sbjct: 2   PAVLRVALPVPLPSLFDYLPPASGEAGVGSRVLVPFGRHRLVGVVVAIDAETAVDGGRLK 61

Query: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLT 122
               +LDD  +   +L   L W + ++    GE YANALP ALR+ K       + W LT
Sbjct: 62  QTLRLLDDDALLDAELMQTLAWAADYWLGAPGEAYANALPLALREPKPLPPIGDEYWSLT 121

Query: 123 ALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVS-STTLKALVEKGWIECEER 181
           + G      G +RG+ K   +L LL  GALS Q L + +       + L   G +E  ER
Sbjct: 122 SAGHSAHDAGSRRGSSKA--LLALLSGGALSAQQLGERQPGWREAARRLAAVGLLERSER 179

Query: 182 KPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLIT 240
            P  RP      A    P LN EQ  A+A+V +  G +  FLL+GVTGSGKTEVYL LI 
Sbjct: 180 PPSVRPL-----APSRAPPLNDEQRQAVASVGASLGQYQPFLLDGVTGSGKTEVYLALIE 234

Query: 241 PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI 300
            VLA+  QAL+LVPEIGL PQT+ R R+R  V VEV+HS L++ +R  AWL AR   A +
Sbjct: 235 QVLAQDRQALLLVPEIGLAPQTVRRLRERLGVGVEVLHSNLSEGDRARAWLRARAGSARV 294

Query: 301 VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP 360
           ++GTRSA+ TP  + G+IIVDEEHD +YKQQ+  RYHARD+A++RA    +P++LGS TP
Sbjct: 295 ILGTRSAVFTPLPRAGLIIVDEEHDGAYKQQEGFRYHARDLALVRARALGVPVLLGSGTP 354

Query: 361 ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN 420
           +LE+L N  +G+Y  L L  R G   P     +D++  +LE GLS  L+  +   ++ G 
Sbjct: 355 SLESLANVEAGRYRSLHLRARPGAVRPPMVQIVDMRAQHLEHGLSPALLTAVAETVARGE 414

Query: 421 QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC 480
           Q ++F NRRG++P L+CH CGW A C RC+   T H    ++ CHHC  ++ V   C  C
Sbjct: 415 QALVFRNRRGYAPVLLCHACGWHAACPRCERPLTLHAGRRQLICHHCDYRQRVPPACPTC 474

Query: 481 GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGT 540
           G+ +L   G GTE+LE  L   FP+   +R+DR++TRR+ + E  L  +R  +  IL+GT
Sbjct: 475 GAGELKAQGQGTERLEEALLAQFPQVPVLRVDRETTRRRDAFEQLLATLRDDQPAILVGT 534

Query: 541 QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH 600
           QMLAKGH  P++TLVA++ VD  L+S DFRA ERLAQL +QVAGRAGRA KPG V+LQTH
Sbjct: 535 QMLAKGHDLPNLTLVAIVGVDEGLHSIDFRAGERLAQLVVQVAGRAGRARKPGRVLLQTH 594

Query: 601 HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRET 660
            PEH LL+ LL + Y   A   L ER+L +LPPYS   L RAEA    QVE FL      
Sbjct: 595 QPEHPLLRCLLAQGYAAAARELLAERRLIRLPPYSHQVLLRAEAVQREQVEAFLAAAHAA 654

Query: 661 LRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLAS 720
           L      D    V GP PAP+  RAG+ R QLLL++ +R  +  +L+  + AL  LP A 
Sbjct: 655 LPA----DDRLQVAGPMPAPMPLRAGRQRGQLLLESASRQALHAMLRPWQLALNALPSAR 710

Query: 721 KVRWSIDIDPQDL 733
           ++RWS+D+DP DL
Sbjct: 711 RLRWSLDVDPIDL 723