Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., Primosomal protein N' from Xanthobacter sp. DMC5

 Score =  422 bits (1086), Expect = e-122
 Identities = 267/747 (35%), Positives = 391/747 (52%), Gaps = 40/747 (5%)

Query: 1   MRPSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSD---FP 57
           M P    V LP+ LD ++ YL+P  +    G  V VP G ++++G+V   T  +      
Sbjct: 1   MSPRTVDVLLPLGLDAAYSYLLPEGMEVSPGDLVHVPLGTKSVIGVVWPRTQAAGGKAVE 60

Query: 58  IEQLKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANAL-----PGALRKGKAAE 112
             +LK+V+A LD  P+ PD ++ L+ W + +   P G     AL     PGA R+     
Sbjct: 61  AGKLKAVKAKLDYVPLPPDLIK-LIDWMADYTLAPRGMVLRMALRHGESPGAARERVGVR 119

Query: 113 LTSHKEWRLTALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEE--VSSTTLKAL 170
           LT     R+TA                +A++L  L  G +  +T    E  VS + +  L
Sbjct: 120 LTGTAPARMTAA---------------RARLLDTLADGFVRGKTEAAREAGVSPSVVDGL 164

Query: 171 VEKGWIECEERKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQ---QGFGCFLLEGVT 227
           V+ G +E     P    +P + +  V  P L+Q QA A AA+ +    + F   LL+GVT
Sbjct: 165 VDDGTLEAVVLPPEPAAYPPDPDHAV--PELSQPQAEAAAAMVAAVKAKTFAVHLLDGVT 222

Query: 228 GSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERL 287
           GSGKTE Y   +   +  G QAL+L+PEI LT   ++RF +RF V     HS ++   R 
Sbjct: 223 GSGKTETYFEAVAEAIRAGRQALILLPEIALTQAFLDRFTERFGVKPAEWHSGVSTRRRA 282

Query: 288 NAWLAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAH 347
                       +V G RSAL  PF  LG+IIVDEEHD +YKQ+D + YHARD+AV+RA 
Sbjct: 283 KVLNEVASGAVKVVAGARSALFLPFRDLGLIIVDEEHDPAYKQEDGVCYHARDMAVVRAR 342

Query: 348 LENIPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVK--GLYLESGLS 405
           L + PIVL SATP++ET  NA  G+Y  L L  R G A       +D++  G      ++
Sbjct: 343 LASAPIVLASATPSIETEVNARRGRYRRLALPVRFGGAKVPGLSPIDLRKEGPPRGRWIA 402

Query: 406 APLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCH 465
             L AE+   L AG Q +LFLNRRG++P  +C  CG    C  C A+   H+    + CH
Sbjct: 403 PRLEAEINTTLEAGEQALLFLNRRGYAPLTLCRSCGHRMRCPSCTAWLVEHRFRRRLTCH 462

Query: 466 HCGSQRPVLHQCKGCGS-TQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLES 524
           HCG Q PV  +C  C +   LV VG G E+L+ ++ TLFP  R++ +  D       + +
Sbjct: 463 HCGYQAPVPEKCPACDAPDSLVPVGPGVERLQEEVQTLFPNARALVLSSDLLGGVERMRA 522

Query: 525 ALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAG 584
            L A+ KG+  +++GTQ++AKGH+FP + LV ++D D  L   D RA+ER  QL  QVAG
Sbjct: 523 ELDAVAKGDVDVVVGTQLVAKGHNFPGLALVGVVDADVGLGHGDPRAAERTFQLVHQVAG 582

Query: 585 RAGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEA 644
           RAGR    G   +QTH PEH +++AL+  D   F    +  R+ A LPP+  ++     A
Sbjct: 583 RAGRGKAEGRGFIQTHMPEHPVMRALVTGDRDAFYDVEIASREEAHLPPFGRMAALIVSA 642

Query: 645 NHTAQVEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQK 704
           +     E   R++  +    P    +  +LGP  APLA   G+ RW+LL+++P    +  
Sbjct: 643 SEAHVAEGHARRLATSAPIVP----DVRILGPAEAPLAILRGRHRWRLLVRSPRNFDLPA 698

Query: 705 ILQSARPALQQLPLASKVRWSIDIDPQ 731
            L+  R    +  +   ++ +ID+DPQ
Sbjct: 699 YLREWRAVAPK--VTGNIKVAIDVDPQ 723