Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 63/176 (35%), Positives = 86/176 (48%), Gaps = 18/176 (10%)

Query: 204 EQAIAIAAVNS---QQGFGCFLLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTP 260
           +QA+AI AV S   Q      L+ G  G GKTEV +         G+Q  VLVP   L  
Sbjct: 609 DQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVPTTLLAQ 668

Query: 261 QTINRFRQRF-NVP--VEVMHSALNDTERLNAWLAARDKVAGIVIGTRSALLTP--FAKL 315
           Q    FR RF N+P  VEV+    +  E+        D    I++GT   L +   FA L
Sbjct: 669 QHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSEIRFADL 728

Query: 316 GIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
           G++IVDEEH    +Q++        V  MRA   ++ I+  +ATP   TL+ A+SG
Sbjct: 729 GLLIVDEEHRFGVRQKEK-------VKAMRA---DVDILTLTATPIPRTLNMAMSG 774