Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 722 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Sphingobium sp. HT1-2

 Score =  393 bits (1009), Expect = e-113
 Identities = 256/741 (34%), Positives = 376/741 (50%), Gaps = 42/741 (5%)

Query: 6   ARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIV---QSLTHQSDFPIEQLK 62
           ARV L        DY IP  +    G  V  P G + LVG+V   +S          +L+
Sbjct: 4   ARVLLLNAALGPLDYRIPHGMTARPGSIVVAPLGPRQLVGVVWDEESFPDVETVGDNRLR 63

Query: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPG-ALRKGKAAELTSHKEWRL 121
           ++  VLD AP  P+ L+ L+ W + +Y  P       AL   +  +G    +      +L
Sbjct: 64  NLLEVLD-APPLPETLRRLIEWTADYYLAPPAAVLRMALASMSALEGTRTVIEYRATGQL 122

Query: 122 TALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEER 181
                EQ  Q ++R   +Q  V  L   G           VS T ++ LV+ G  E  E 
Sbjct: 123 PDRMTEQRTQAMERIGDRQGLVRELAMIGG----------VSDTVIRGLVKAGAFEPVEV 172

Query: 182 KPVARPWPQELEAKVDKPRLNQEQAIAIA----AVNSQQGFGCFLLEGVTGSGKTEVYLN 237
             V  P+P+   A    P L+++Q  A      AV + + F  FLL+GVTGSGKTEVY  
Sbjct: 173 S-VYTPFPEPDPAHAP-PALSEQQMAAATDMADAVRAHE-FAPFLLDGVTGSGKTEVYFE 229

Query: 238 LITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKV 297
            I   +  G+Q LVL+PEI LT   + RF +RF       HS L  +ER  AW A     
Sbjct: 230 AIAAAIRAGKQTLVLLPEIALTEPFLERFEKRFGTVPVNWHSGLRQSERRRAWRAIAAGE 289

Query: 298 AGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGS 357
           A +V+G RSAL  P+  LG+I+VDE H++S+KQ++ + YHARDVAVMR  +E+ P+VL S
Sbjct: 290 ARVVVGARSALFLPYPNLGLIVVDEAHEASFKQEEGVHYHARDVAVMRGLIEHFPVVLAS 349

Query: 358 ATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYL-----ESG--LSAPLIA 410
           ATPA+ET H    G+Y  ++L  R G A        D++G+ L     E G  ++ PL+ 
Sbjct: 350 ATPAIETRHQVDLGRYREIKLPARFGGA-----QMPDIEGINLLTDPPERGRWIAPPLVV 404

Query: 411 EMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQ 470
            M   L+ G Q +LFLNRRG++P  +C  CG+  +C  C ++   H+ +  + CHHCG  
Sbjct: 405 AMEEVLAKGEQSLLFLNRRGYAPLTLCRHCGYRFQCPNCTSWMVEHRLTKRLACHHCGHV 464

Query: 471 RPVLHQCKGC-GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAI 529
            P    C  C     LV  G G E++  ++  L+P+ R      D+          + ++
Sbjct: 465 IPAPRFCPECKEEDSLVACGPGVERIADEVKALWPQARVAIATSDTLHSPARAADFVKSV 524

Query: 530 RKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRA 589
             G+  I++GTQ++ KG+HFP++TLV ++D D  L   D RASER  Q  +QVAGRAGR 
Sbjct: 525 EAGDIDIIVGTQLITKGYHFPNLTLVGVIDADLGLEGGDLRASERTFQQIMQVAGRAGRG 584

Query: 590 SKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQ 649
            KPG V +QT  P+  ++QAL+  D   F L   E R+ A  PP+   +     +  + +
Sbjct: 585 EKPGHVFIQTRMPDAEVIQALIAGDSERFYLIETENRRRANAPPFGRFAAIIISSEDSDE 644

Query: 650 VEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSA 709
                R + ++    P  +    V GP PAPL+   G+ R +LL+    +  +Q ++   
Sbjct: 645 AAQTARLIGKSA---PQVEG-MRVYGPAPAPLSVLRGRHRHRLLIHATRQVDIQSVI--- 697

Query: 710 RPALQQLPLASKVRWSIDIDP 730
           R  L  L   S  R ++D+DP
Sbjct: 698 REWLGNLVWKSTTRVAVDVDP 718