Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 6e-13
 Identities = 53/152 (34%), Positives = 69/152 (45%), Gaps = 11/152 (7%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF---NVPVEVMH 278
           L+ G  G GKTEV +      +  G Q  VLVP   L  Q  N FR RF    V VEVM 
Sbjct: 627 LVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVM- 685

Query: 279 SALNDTERLNAWLAARDKVAG---IVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDS 333
           S     + + A  AA D   G   I+IGT   L     F  LG+ I+DEEH    +Q++ 
Sbjct: 686 SRFKSAKEVAA--AAADLAEGKIDILIGTHKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQ 743

Query: 334 LRYHARDVAVMRAHLENIPIVLGSATPALETL 365
           L+    +V ++      IP  L  A   +  L
Sbjct: 744 LKALRSEVDILTLTATPIPRTLNMAVAGMRDL 775