Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., primosomal protein N' from Paraburkholderia sabiae LMG 24235

 Score =  489 bits (1258), Expect = e-142
 Identities = 299/748 (39%), Positives = 411/748 (54%), Gaps = 28/748 (3%)

Query: 7   RVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKSVQA 66
           RV L  PL   FDY   A L P  G  V VPFG++ +VG+V  +T  SD P ++LKSV +
Sbjct: 12  RVALDHPLPTLFDYRCDAALAPTPGMLVSVPFGKRHIVGLVMEVTAHSDVPADRLKSVHS 71

Query: 67  VLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTS----HKEWRLT 122
           +    P        L  + + +Y   +GE    ALP ALR   AA  T      + +RL 
Sbjct: 72  ICTACPPLSKHWLQLAQFAADYYQRGIGEVALPALPQALRD--AARWTRLFAPEERYRLL 129

Query: 123 ALGQEQLMQGVKRGAVKQAQVLHLLQHG----ALSHQTLLDEEVSSTTLKALVEKGWIEC 178
             G+  L   +   A    ++   L       A+  + L     ++ TL+A   +GW+  
Sbjct: 130 PAGRAALPDALPARATALRRLAAALAETESLPAVDARAL--HAKATATLEAWQAEGWVAL 187

Query: 179 EERKPVA-RPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLN 237
           +   P A R            P L  EQ  A+ A+   QGF  FLL GVTGSGKTEVYL 
Sbjct: 188 DVIDPAAPRLSLDHSPQNASLPTLTDEQTTAVEAIREAQGFAPFLLHGVTGSGKTEVYLR 247

Query: 238 LITPVLARGEQA--LVLVPEIGLTPQTINRFRQRF----NVPVEVMHSALNDTERLNAWL 291
            +  +LA   QA  LVLVPEI LTPQ    FR RF    +  +  +HS L + ER   W 
Sbjct: 248 ALAGLLAANPQAQALVLVPEINLTPQFEAAFRARFASMDDSEIVTLHSGLAEGERARNWF 307

Query: 292 AARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENI 351
           AA    A IV+GTR A++     L II+VDEEHD +YKQQ+ LRY ARD+A+ RA    +
Sbjct: 308 AAHTGRARIVLGTRLAVMASLPHLAIIVVDEEHDPAYKQQEGLRYSARDLAIWRAKQLAV 367

Query: 352 PIVLGSATPALETLHNALSGKYHHLQLTQRA-GNALPTRNHALDV-----KGLYLESGLS 405
           P+VLGSATP+LE+      G+Y  L L++RA  +A+      +D+     +G     GLS
Sbjct: 368 PVVLGSATPSLESWWQVDQGRYKRLTLSRRAVADAVLPTVRLVDLEDERRRGRASVEGLS 427

Query: 406 APLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCH 465
            PLIA ++  L  G Q ++FLNRRG++P L C  CGW+A C RC AY   H+    +RCH
Sbjct: 428 GPLIAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHKPERALRCH 487

Query: 466 HCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESA 525
           HCG +  +   C  CG+  +  +G GT+++E  L    P  R +RID DSTRRKGS ++ 
Sbjct: 488 HCGWEARIPRSCPECGNVDIAPLGRGTQRIEEALAGAVPGARVLRIDADSTRRKGSAQAL 547

Query: 526 LTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGR 585
            + +  GE  IL+GTQM+AKGH F  V+LV +L+ D +L+S DFRASERL    +QV+GR
Sbjct: 548 FSDVHAGEVDILVGTQMIAKGHDFRRVSLVGVLNADTALFSHDFRASERLFAQLMQVSGR 607

Query: 586 AGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEAN 645
           AGRA  PGEV++QT +P H+L  AL  +DY  FA + L ER+ A LPP+ +  + RAE  
Sbjct: 608 AGRAGLPGEVLVQTRYPTHALYHALARQDYVGFANSTLSERRDAHLPPFVYQGMLRAEGR 667

Query: 646 HTAQVEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKI 705
                  FL+Q    L   P   S   V    P  + K     R QLL+++ +R  +Q  
Sbjct: 668 TLDAALTFLQQAAAALSEIP-AASRVTVYDAVPLTIVKVMHVHRAQLLVESASRAALQAT 726

Query: 706 LQSARPALQQLPLASKVRWSIDIDPQDL 733
           L++ +P L+   +   +RWSI++DP D+
Sbjct: 727 LRAWQPLLR--TMKGVLRWSIEVDPLDI 752