Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1123 a.a., transcription-repair coupling factor from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 52.8 bits (125), Expect = 1e-10
 Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 27/214 (12%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQR---FNVPVEVMH 278
           L+ G  G GKTE+ +         G+Q  +LVP   L  Q    FR R   F V V+ ++
Sbjct: 586 LVCGDVGFGKTEIAIRAAFKAACDGKQVAILVPTTILAMQHYRTFRDRLEQFPVTVDYVN 645

Query: 279 SALNDTERLNAWLAARDKVAGIVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDSLRY 336
                 +  +      +    I+IGT   +     F  LG++I+DEE     K ++ L+ 
Sbjct: 646 RFKTAKDTKDTLKRVAEGKVDILIGTHRIVSKDVKFKDLGLMIIDEEQKFGVKTKEKLK- 704

Query: 337 HARDVAVMRAHLENIPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALP--TRNHALD 394
                  M+ +++ + +   +ATP   TLH +L G      +     N  P  T  H  D
Sbjct: 705 ------EMKINVDTLTL---TATPIPRTLHFSLMGARDLSVIATPPPNRQPVKTELHVFD 755

Query: 395 VKGLYLESGLSAPLIAEMRRHLSAGNQVMLFLNR 428
                 E+ +   ++ EM+R    G QV    NR
Sbjct: 756 ------EALIRDAIVYEMKR----GGQVFFVHNR 779