Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 843 a.a., primosomal protein N' from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  333 bits (855), Expect = 2e-95
 Identities = 204/606 (33%), Positives = 317/606 (52%), Gaps = 29/606 (4%)

Query: 142 QVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKPVARPWPQELEAKVDKPRL 201
           Q +HL   G        +  +S++++  L++KG +E  ++  +   +P +   +     L
Sbjct: 249 QDIHLNYMGVDKAALTNNPHLSASSINTLIKKGVLEQFDK--IVSRFPMDHGTQQLPMAL 306

Query: 202 NQEQAIAIAAVNSQQGFGCF------LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPE 255
           ++ Q  A       +  G F      LL GVTGSGKTEVY++LI   L  G Q L L+PE
Sbjct: 307 SEHQLQA-----KDEILGLFKEKDTVLLHGVTGSGKTEVYIDLIKHALDSGGQVLYLLPE 361

Query: 256 IGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIVIGTRSALLTPFAKL 315
           I LT Q + R  + F   + V HS  +D ER   W         +V+G RS++  PF  L
Sbjct: 362 IALTAQIVTRLMKVFGDKLGVYHSKFSDNERAEVWQGILSGRFQVVVGVRSSVFLPFHDL 421

Query: 316 GIIIVDEEHDSSYKQQDSL-RYHARDVAVMRAHLENIPIVLGSATPALETLHNALSGKYH 374
            ++I+DEEH++SYKQ +   RY+AR+  +M AHL+    +LGSATP++E+ +N  +G++ 
Sbjct: 422 SLVIIDEEHEASYKQYEPAPRYNARETGLMMAHLQGAKTLLGSATPSIESYYNCKTGRWG 481

Query: 375 HLQLTQRAGNALPTRNHALDVKGLY----LESGLSAPLIAEMRRHLSAGNQVMLFLNRRG 430
            + +T+R G A       +D +       + S  SA L+ ++   L    QV+LF NRRG
Sbjct: 482 LVSMTKRFGEARLPDIELVDTRREQQRKNMHSHFSAKLLQDIEERLKRHEQVILFQNRRG 541

Query: 431 FSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGSTQLVTVGV 490
           ++P + C EC WI +C+ C    +YH+ +NE+RCH+CG    + H C  CG+T L ++G 
Sbjct: 542 YAPFISCDECSWIPKCKFCAVSLSYHKFNNELRCHYCGYHERMPHDCPACGATTLRSMGF 601

Query: 491 GTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQMLAKGHHFP 550
           GTE++E +L  L P+    R+D D+T++K S +  ++    G   +L+GTQM+ KG  F 
Sbjct: 602 GTEKVEDELKLLLPDAEVQRMDLDTTKKKNSYQQIISDFESGRTNVLVGTQMVTKGLDFE 661

Query: 551 DVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQAL 610
           +V+LV +L+ D  +   DFRA ER  QLF+QV+GRAGR  KPG V++QT  P   +   +
Sbjct: 662 NVSLVGILNADTIINFPDFRAHERAYQLFVQVSGRAGRKGKPGSVIIQTRDPLQPIFNKV 721

Query: 611 LHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLRCNPWFD-- 668
              DY       +EER     PP  F  + R    H    +D + +    +      D  
Sbjct: 722 RSNDYQTLYEHEIEERMRFGYPP--FTRMIRVTVKH---ADDKIAENAAIVLAKDLTDRL 776

Query: 669 SECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQ-SARPALQQLPLASK---VRW 724
            +  VLGP    + K    F  ++ ++ P  T   K  +     A+  L L S    +R 
Sbjct: 777 GKQQVLGPEVPYIFKIRNLFLQEIHIKLPRDTTNLKAAKGQIAQAIFNLKLLSDFKGIRV 836

Query: 725 SIDIDP 730
             D+DP
Sbjct: 837 VADVDP 842



 Score = 58.9 bits (141), Expect = 1e-12
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 6   ARVCLPVPLDKSFDYLIPAHLFP--VLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKS 63
           A V LP+PL K + Y IP  +    ++G RV V FG + ++  + +  H++     Q K 
Sbjct: 22  ADVILPLPLPKLYTYRIPFEMNDEVLVGARVIVQFGSKKVLSCIVADIHENAPADYQAKY 81

Query: 64  VQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEW 119
           V  VLDD P+       L  W + +Y   LGE    ALP AL+    + +  H  +
Sbjct: 82  VLDVLDDKPIVTAPQLKLFKWIADYYMCTLGEVINAALPSALKLSSESRIQLHPHY 137