Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1160 a.a., Transcription-repair coupling factor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 53.1 bits (126), Expect = 8e-11
 Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 5/149 (3%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRFN---VPVEVMH 278
           L+ G  G GKTEV L      +  G Q   L P   L  Q       RF+   V V  M 
Sbjct: 634 LVCGDVGFGKTEVALRAAFVAVTGGRQVAFLAPTTLLAEQHFQTLSDRFSKWPVKVAEMS 693

Query: 279 SALNDTERLNAWLAARDKVAGIVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDSLRY 336
              +  E   A     D    IV+GT   L     F  LG++I+DEEH    + +++++ 
Sbjct: 694 RFRSAKEITAAAKGLADGSVDIVVGTHKLLSESVKFKDLGLLIIDEEHRFGVRHKEAMKA 753

Query: 337 HARDVAVMRAHLENIPIVLGSATPALETL 365
              +V V+      IP  LG A   L  L
Sbjct: 754 LRAEVDVLTLTATPIPRTLGMALEGLRDL 782