Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1135 a.a., Transcription-repair-coupling factor from Methylophilus sp. DMC18

 Score = 53.5 bits (127), Expect = 6e-11
 Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF-NVPVEVMHSA 280
           L+ G  G GKTEV L      +  G Q  VLVP   L  Q    F  RF   P++V   +
Sbjct: 618 LVCGDVGFGKTEVALRAAFVAVMGGRQVAVLVPTTLLAEQHYQNFVDRFAEWPIKVAEIS 677

Query: 281 LNDT--ERLNAWLAARDKVAGIVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDSLRY 336
              T  E+  A     D    I+IGT   +     F  LG+ I+DEEH          R+
Sbjct: 678 RFRTAKEQAEAIKGLADGSIDIIIGTHRLIQKDVKFKNLGLAILDEEH----------RF 727

Query: 337 HARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
             R    M+A    + ++  +ATP   TL  A+ G
Sbjct: 728 GVRQKEQMKALRAEVDVLTLTATPIPRTLSMAMEG 762