Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., primosomal protein N' from Magnetospirillum magneticum AMB-1

 Score =  376 bits (966), Expect = e-108
 Identities = 248/726 (34%), Positives = 361/726 (49%), Gaps = 24/726 (3%)

Query: 10  LPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKSVQAVLD 69
           LP+PL  ++DY +        G  V+VP G + + G+V          + +L+ V   L 
Sbjct: 3   LPLPLGGAYDYAVGDEALRP-GDFVEVPLGNRLVAGVVWG-AGDGRVDMAKLRPVAHRLS 60

Query: 70  DAPVWPDKLQSLLHWCSQFYHYPLGETY--ANALPGALRKGKAAELTSHKEWRLTALGQE 127
            A   P+  +  + W + +   P G     A ++P AL       +      RL A    
Sbjct: 61  -ARHLPEVSRRFVDWVAAYTLAPPGAVLKMAMSVPSALEP-----VPPILALRLAAAPPA 114

Query: 128 QLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKPVARP 187
                 +R  ++ A  L  L    L+ +      V    +K LVE G ++  E  P    
Sbjct: 115 FKDTAARRKVMEAAGRLPPLSAADLAREA----GVGPAVVKGLVEAGVLDVVELPPPPAF 170

Query: 188 WPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLITPVLARGE 247
            P +L+A   +    Q+            GF   L++GVTGSGKTEVY   +   LARG+
Sbjct: 171 APPDLQAPRAELSPGQQDGADTLVAALGGGFSVQLIDGVTGSGKTEVYFEAVAEALARGK 230

Query: 248 QALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIVIGTRSA 307
           Q LVL+PEI L+ Q ++RFR+RF V   + HS L D  R   W A     A IV+G RS 
Sbjct: 231 QVLVLLPEIALSAQWLDRFRRRFGVRPAMWHSDLGDATRRKTWRAVASGEAAIVVGARSG 290

Query: 308 LLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPALETLHN 367
           L  PF  LG+I+VDEEHD ++KQ+D + YHARD+AV+RA L   P+VL SATP+LE+L N
Sbjct: 291 LFLPFHNLGLIVVDEEHDPAFKQEDHVCYHARDMAVVRARLGGFPVVLASATPSLESLAN 350

Query: 368 ALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESG--LSAPLIAEMRRHLSAGNQVMLF 425
             +G+Y  + L  R   A+      +D++      G  LS  L+A +   ++AG Q ML+
Sbjct: 351 VQAGRYGLIHLPDRHAGAVLPDIVPVDLRRYPPPRGRWLSPQLVAALEEVMAAGEQAMLY 410

Query: 426 LNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC-GSTQ 484
           LNRRG++P  +C  CG   +C  C A+   H+ +  + CHHCG    +  +C  C     
Sbjct: 411 LNRRGYAPLTLCRTCGHRLQCPHCTAWLVEHRSAGRLICHHCGHHIRLPPKCPECEAEAN 470

Query: 485 LVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQMLA 544
               G G E++  +   LFP  R   +  D+     +    +  +   E  +L+GTQ++A
Sbjct: 471 FAACGPGVERVAEEAALLFPNARIAVMTSDTCSGPHAAAEFVRRVSDHEIDLLVGTQIVA 530

Query: 545 KGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEH 604
           KG+HFP +TLV ++D D  L   D RA ER  QL  QVAGRAGRA +PG V+LQT+ P+H
Sbjct: 531 KGYHFPMLTLVGVVDADLGLDGGDLRAGERTHQLLSQVAGRAGRAERPGRVLLQTYQPDH 590

Query: 605 SLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLRCN 664
            +++AL   +   F     E R+ A +PPY  L+           VE + R    TL   
Sbjct: 591 PVMRALRSGERDAFIAREAEARRDAGMPPYGRLAALILSGADVGIVESYAR----TLAKA 646

Query: 665 PWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLASKVRW 724
                   VLGP PAP+A   G+ R + L+Q+     +Q +L   R  L +      VR 
Sbjct: 647 APRTEGVQVLGPAPAPMALLRGRHRRRFLVQSARSVNLQALL---RDWLARAAPPKSVRV 703

Query: 725 SIDIDP 730
            +D+DP
Sbjct: 704 QVDVDP 709