Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1148 a.a., Transcription-repair coupling factor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 57.4 bits (137), Expect = 4e-12
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 21/158 (13%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF-NVPVEV---- 276
           L+ G  G GKTEV +      +   +Q  VLVP   L  Q  + FR RF N PV +    
Sbjct: 625 LVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLS 684

Query: 277 -MHSALNDTERLNAWLAARDKVAGIVIGTRSALLT--PFAKLGIIIVDEEHDSSYKQQDS 333
              SA   T+ L    AA  K+  I+IGT   L +      LG++IVDEEH    +    
Sbjct: 685 RFRSAKEQTQILAE--AAEGKI-DILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVR---- 737

Query: 334 LRYHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
              H   +  MRA   ++ I+  +ATP   TL+ A+SG
Sbjct: 738 ---HKERIKAMRA---DVDILTLTATPIPRTLNMAMSG 769