Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., replication restart DNA helicase PriA from Kangiella aquimarina DSM 16071

 Score =  707 bits (1825), Expect = 0.0
 Identities = 368/731 (50%), Positives = 482/731 (65%), Gaps = 12/731 (1%)

Query: 5   IARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKSV 64
           I +V +P PL +SFDYL+  H  P +G RV+V FGRQ LVGIV + T  S  P  +LK++
Sbjct: 7   ILKVAVPTPLRRSFDYLVGQHATPPIGSRVRVSFGRQQLVGIVVAHTEISSTPQNKLKAI 66

Query: 65  QAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLTAL 124
             V+D  P+ P+ L  LL W + +Y +P+G+ +   LP  L KG+ A+L     W+LTA 
Sbjct: 67  LEVIDSEPLLPNHLFKLLLWAADYYMHPIGDVFTTCLPSLLNKGEPAQLEPEYCWKLTAD 126

Query: 125 GQEQLMQGVKRGAVKQAQVL--HLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERK 182
           GQ      + + AVKQ ++L   +   G +    L   E++ + LK LVEKGW++    K
Sbjct: 127 GQSAFPD-LNKNAVKQHKILLWAIDHQGTIQASDLEQLELTPSQLKPLVEKGWLQ----K 181

Query: 183 PVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLITP 241
            V +P P       +   LN EQ  A+ ++    G F  FLL+GVTGSGKTEVYL LI  
Sbjct: 182 EVIKPTPTSHGQTSNSLDLNPEQRHAVESMQKSIGQFQGFLLDGVTGSGKTEVYLQLIEK 241

Query: 242 VLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIV 301
           VL   +Q LVLVPEIGLTPQT+ RF++RF+  + ++HS L D +RLN WL A+  +  IV
Sbjct: 242 VLTNQQQVLVLVPEIGLTPQTVQRFKRRFDCDIAMLHSGLTDRQRLNIWLKAKQGLTSIV 301

Query: 302 IGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPA 361
           IGTRS+L TPFA LG+I+VDEEHD SYKQQ+  RY ARD+A++RA  E  P+VLGSATP+
Sbjct: 302 IGTRSSLFTPFANLGLIVVDEEHDVSYKQQEGFRYSARDLAILRARDEQTPVVLGSATPS 361

Query: 362 LETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGNQ 421
           +E+++N   GK  HL L +RA NA P     LD++  +L +GLS PL+  M+RHL  GNQ
Sbjct: 362 MESMYNVNQGKLVHLTLRKRAANAKPPHIKVLDIRQRHLNNGLSQPLLDNMQRHLDNGNQ 421

Query: 422 VMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCG 481
            ++FLNRRGF+P+LMCH CGWIA+CQRCD + T H     + CHHC  Q  +  QC  CG
Sbjct: 422 CLVFLNRRGFAPSLMCHGCGWIADCQRCDKHMTLHLQQKRLHCHHCDKQVFMPKQCPECG 481

Query: 482 STQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQ 541
           +  L  VG+GTE+LE  L   FP  + VRIDRDSTRRK +++  +TAI+  E  IL+GTQ
Sbjct: 482 AEDLFPVGLGTERLEQALINAFPNKKVVRIDRDSTRRKQAMQDYVTAIKNNEVDILVGTQ 541

Query: 542 MLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHH 601
           MLAKGHHFP++T+VA++D+DG L+S+DFRA+ER AQL  QVAGRAGRA +PGEVV+QTHH
Sbjct: 542 MLAKGHHFPNLTMVAVVDIDGCLFSADFRATERTAQLLTQVAGRAGRADQPGEVVIQTHH 601

Query: 602 PEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETL 661
           PEH LL  L  +DY   +   L ER+   LPPY+ ++LFRAEA        FL+ V ++L
Sbjct: 602 PEHPLLLNLFTQDYQSLSQQILAEREAGMLPPYASMALFRAEATTLQYPMQFLKDVSQSL 661

Query: 662 RCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLASK 721
                 D      GP PAP+AKRAGK R QLL Q   R L+Q+ L+     ++QLP A K
Sbjct: 662 HQITGLD----CFGPFPAPMAKRAGKMRAQLLCQAQQRGLIQRALKPVISNIEQLPSARK 717

Query: 722 VRWSIDIDPQD 732
           VRWSIDIDPQD
Sbjct: 718 VRWSIDIDPQD 728