Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 732 a.a., primosomal protein N' from Erwinia tracheiphila SCR3

 Score =  784 bits (2024), Expect = 0.0
 Identities = 392/730 (53%), Positives = 508/730 (69%), Gaps = 3/730 (0%)

Query: 5   IARVCLPVPLDKSFDYLIPAHL-FPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKS 63
           + +V LP+ L +SFDYL+P HL     G RV VPFG +   GIV S+T  SD P EQLK+
Sbjct: 3   VVQVALPISLARSFDYLLPPHLSVATTGVRVSVPFGTRKATGIVVSITEHSDLPSEQLKT 62

Query: 64  VQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLTA 123
           V  VLD+  ++   L  +L W + +YHYPLGE   +A+P  LR+GK A+     +W ++ 
Sbjct: 63  VDDVLDNRSLFSPSLWRILLWAADYYHYPLGEVLFHAIPVLLRQGKPAQEAPLWQWYISE 122

Query: 124 LGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKP 183
            G+    + +KR   KQ + L +L+   L    +   ++S T L +L  KG  + +  + 
Sbjct: 123 TGKATAPESLKR-TPKQQKALAVLRQKNLWRHEVRQHDISDTVLLSLRAKGLCDLQPAQI 181

Query: 184 VARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLITPV 242
               W      K ++ RLN EQA A+ A+ S+   F  +LL G+TGSGKTEVYLN +  +
Sbjct: 182 TREDWRSNYSVKGERLRLNTEQATAVGAIRSEDNQFTAWLLAGITGSGKTEVYLNALENI 241

Query: 243 LARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIVI 302
           LA+G QALVLVPEIGLTPQTI RFR+RFN P++V+HS LN++ERL  WL A +    IVI
Sbjct: 242 LAKGSQALVLVPEIGLTPQTIARFRERFNAPIDVLHSGLNNSERLAVWLRAYNGETAIVI 301

Query: 303 GTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPAL 362
           GTRSAL TPFA+LG+II+DEEHDSSYKQQ+  RY ARD+AV RA  ENIP+V+G+ATPAL
Sbjct: 302 GTRSALFTPFARLGVIIIDEEHDSSYKQQEGWRYQARDLAVFRAQQENIPVVMGTATPAL 361

Query: 363 ETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGNQV 422
           ETL N   GKY  L L +RAGNA       +D+KG+ LE GLS  L+ ++  HL AGNQV
Sbjct: 362 ETLQNVKLGKYRQLNLCKRAGNACQATQQLIDLKGVKLEGGLSPMLLRKIGLHLKAGNQV 421

Query: 423 MLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGS 482
           +LFLNRRGFSPA++CHECGWIAECQRCD YYT HQH  ++RCHHC SQRPV HQC  CGS
Sbjct: 422 LLFLNRRGFSPAMLCHECGWIAECQRCDRYYTLHQHQRQLRCHHCDSQRPVPHQCPQCGS 481

Query: 483 TQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQM 542
           T L+ VG+GTEQLE  L  LFP+    RIDRD+T RKG+LE  L  + +G  +IL+GTQM
Sbjct: 482 THLMPVGLGTEQLEQNLSQLFPDVPLTRIDRDTTSRKGALEQQLADVNRGGSRILVGTQM 541

Query: 543 LAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHP 602
           LAKGHHFPDVTLV+LLDVDG+L+S+DFR++ER AQL+ QVAGRAGRA K GEV+LQTHHP
Sbjct: 542 LAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVLLQTHHP 601

Query: 603 EHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLR 662
           +H LLQ LLH+ Y  FA  AL ERK   LPP++  +LFR++ +   Q   FL+Q+R  L 
Sbjct: 602 DHPLLQTLLHQGYDAFAQQALTERKTVFLPPFTSHALFRSDDHDNQQAPLFLQQLRNLLE 661

Query: 663 CNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLASKV 722
            +P  D    ++GP PA   KR+G++RWQLLLQ P+R  +Q++++   P +  LP A KV
Sbjct: 662 ASPLKDDAFWLMGPIPALQPKRSGRYRWQLLLQHPSRGHLQRLIKLTLPLMSTLPQAKKV 721

Query: 723 RWSIDIDPQD 732
           +W++D+DP +
Sbjct: 722 KWTLDVDPTE 731