Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1164 a.a., transcription-repair coupling factor from Escherichia coli ECRC100

 Score = 60.1 bits (144), Expect = 6e-13
 Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 17/156 (10%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF-NVPVEV-MHS 279
           L+ G  G GKTEV +      +   +Q  VLVP   L  Q  + FR RF N PV + M S
Sbjct: 641 LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLS 700

Query: 280 ALNDTERLNAWLA--ARDKVAGIVIGTRSALLT--PFAKLGIIIVDEEHDSSYKQQDSLR 335
                +     LA  A  K+  I+IGT   L +   F  LG++IVDEEH    +      
Sbjct: 701 RFRSAKEQTQILAEVAEGKI-DILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVR------ 753

Query: 336 YHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
            H   +  MRA   N+ I+  +ATP   TL+ A+SG
Sbjct: 754 -HKERIKAMRA---NVDILTLTATPIPRTLNMAMSG 785