Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 732 a.a., primosomal protein N' from Dickeya dadantii 3937

 Score =  813 bits (2100), Expect = 0.0
 Identities = 411/730 (56%), Positives = 518/730 (70%), Gaps = 3/730 (0%)

Query: 5   IARVCLPVPLDKSFDYLIPAHLFP-VLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKS 63
           + +V LPVPL ++FDY +P  + P V G RV VPFG + ++GIV +L+  S  P+EQLK 
Sbjct: 3   VVQVALPVPLTRTFDYRLPQGITPPVPGARVSVPFGNRKMIGIVTALSAGSALPLEQLKP 62

Query: 64  VQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLTA 123
           +  VLDDAP++ D L  +L W +++YHYPLG+   +ALP  LR+GK A      +W  T 
Sbjct: 63  LHDVLDDAPLFQDSLWHILLWAAEYYHYPLGDVLFHALPILLRQGKPAHSAPLWQWFATE 122

Query: 124 LGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKP 183
            G+   +  +KR A KQ Q L  L  G L    + + E++   L+AL EKG  E      
Sbjct: 123 QGRATPVNALKR-APKQQQALAALLQGPLYRHQVAETELTEAALQALREKGLSELRALPQ 181

Query: 184 VARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLITPV 242
             R W  +     ++ RLN EQA A+ A+ S+   F  +LL G+TGSGKTEVYL+++  +
Sbjct: 182 QVRDWRDDFSLTGERLRLNTEQATAVGAIRSEDDHFAAWLLAGITGSGKTEVYLSVLENI 241

Query: 243 LARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIVI 302
           LA+G+QALVLVPEIGLTPQTI RFR RFN PVE +HS LND ERL+ WL AR   A IVI
Sbjct: 242 LAQGKQALVLVPEIGLTPQTIARFRDRFNAPVEALHSGLNDGERLSVWLRARQGEAAIVI 301

Query: 303 GTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPAL 362
           GTRSAL TPFA+LG+I++DEEHD SYKQQ+  RYHARD+AV RA  E+IPIV+GSATPAL
Sbjct: 302 GTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRARQEDIPIVMGSATPAL 361

Query: 363 ETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGNQV 422
           ETL+N   GKY  L+L++RAGNA   + H LD+KGL L +GLS PLI+ +R HL+A NQV
Sbjct: 362 ETLYNVQIGKYRQLRLSKRAGNARLAQQHLLDLKGLPLTTGLSQPLISRIRHHLAADNQV 421

Query: 423 MLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGS 482
           +LFLNRRGF+P ++CHECGWIAECQRCD+YYT HQH   MRCHHC SQRP+  QC  CGS
Sbjct: 422 ILFLNRRGFAPVVLCHECGWIAECQRCDSYYTLHQHQRMMRCHHCDSQRPIPQQCPQCGS 481

Query: 483 TQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQM 542
           T LV VG+GTEQLE  L  LFPE    RIDRD+T RKG+LE  L  +R+G  +ILIGTQM
Sbjct: 482 THLVPVGLGTEQLEQALPALFPEAPITRIDRDTTSRKGALEQQLAQVRQGGARILIGTQM 541

Query: 543 LAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHP 602
           LAKGHHFPDVTLVALLDVD SL+S+DFRA+ER AQL+ QV+GRAGRA K GEVVLQTHHP
Sbjct: 542 LAKGHHFPDVTLVALLDVDSSLFSADFRATERFAQLYTQVSGRAGRAGKAGEVVLQTHHP 601

Query: 603 EHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLR 662
           EH LLQ LLH+ Y  FA   L+ER+   LPP++   LFRA+ +   Q   FL+Q+R  L 
Sbjct: 602 EHPLLQTLLHQGYDAFASQTLKERQSVFLPPFTSHVLFRADDHDNQQASLFLQQLRNLLE 661

Query: 663 CNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLASKV 722
            +P  D    ++GP PA   KRAG+FRWQLLLQ P+R  +Q++++++ P +  LP   KV
Sbjct: 662 ASPLRDDSLWLMGPVPALQPKRAGRFRWQLLLQHPSRATLQRLIRNSMPLIDTLPQTRKV 721

Query: 723 RWSIDIDPQD 732
           +W +D+DP D
Sbjct: 722 KWVMDVDPTD 731