Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 840 a.a., primosomal protein N' from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  359 bits (922), Expect = e-103
 Identities = 245/715 (34%), Positives = 371/715 (51%), Gaps = 54/715 (7%)

Query: 54  SDFPIEQLKSVQAVLD-----DAPVWPDK------------LQSLLHWCSQFYHYPLGET 96
           SDFPI+  +  Q +LD     DA  + D             ++SL+   +   +  + E 
Sbjct: 141 SDFPIDDRE--QIILDALEKNDALTYEDCGKLLGIKSSYQIIKSLVIKEAVLVYEQVKEK 198

Query: 97  YANALPGALRKGKAAELTSHKEWRLTALGQEQLMQGVKRGAV-----KQAQVLHLLQHG- 150
           YA  +   + K KA   TS K   L AL  +QL +  K+  +     ++  V H  +   
Sbjct: 199 YAPKVESRI-KLKAPYSTSKKA--LEALF-DQLSKNTKQEEILLKFLQEIPVFHAPERNE 254

Query: 151 -ALSHQTLLDEEVSSTTLKALVEKGWIECEERKPVARPWPQELEAKVDKPRLNQEQAIAI 209
             L  + + D  +S ++LK L++   +E  E K +   + + L +   + +L   Q   +
Sbjct: 255 KGLEKKVITDAGLSPSSLKTLIKNDILE--EFKVIVSRF-ENLPSDDREIKLADFQEEGL 311

Query: 210 AAVNSQ-QGFGCFLLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQ 268
           +++  Q       LL G+TGSGKTE+Y++LI  VL  G Q L+L+PEI LT Q ++R ++
Sbjct: 312 SSIKEQFDQKQTVLLHGITGSGKTEIYIHLIREVLDSGSQVLLLLPEIALTTQIVSRLQK 371

Query: 269 RFNVPVEVMHSALNDTERLNAWLAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSY 328
            F   + + HS  +D ER+  W          V+G RSA+  PF  LG+IIVDEEH+ SY
Sbjct: 372 VFGSEMGIYHSKHSDNERVEVWQGVLSGRFSFVVGVRSAIFLPFDSLGMIIVDEEHEPSY 431

Query: 329 KQQDSL-RYHARDVAVMRAHLENIPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALP 387
           KQ D   R+ ARD A+M + L     +LGSATP+ E+ +NA + KY ++ L++R G A  
Sbjct: 432 KQFDPAPRFQARDAAIMLSWLHQSKTLLGSATPSYESFYNARTQKYGYVHLSKRFGEAQL 491

Query: 388 TRNHALDV----KGLYLESGLSAPLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWI 443
              H  D+    K   L+   +  +  +++  L    Q+++F NRRG++P + C ECGWI
Sbjct: 492 PEFHVADILVDKKKNLLKLDFTRIMREKIQEALDRQEQILIFQNRRGYAPYMSCEECGWI 551

Query: 444 AECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLF 503
            EC+ CD   TYHQ+S EMRCH+CG +  V   C  CGS +L TVG+GTE+LE  L  LF
Sbjct: 552 PECEHCDVNLTYHQYSEEMRCHYCGFKEKVPRACPACGSHKLTTVGIGTERLEESLSLLF 611

Query: 504 PEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGS 563
           PE R  R+D D+TR K + +        G   IL+GTQM+ KG  F  VT+V ++D D  
Sbjct: 612 PEARVGRMDLDTTRSKYAYQRIFDEFSSGNLDILVGTQMITKGLDFDRVTVVGIVDADRI 671

Query: 564 LYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTAL 623
           LY  DFR+ ER  Q   QVAGRAGR ++ G VV+QT  P+H + + ++  ++  F LT +
Sbjct: 672 LYFPDFRSGERAFQQITQVAGRAGRRNRRGNVVIQTRRPDHEVFEKVIQGNFSEFYLTEM 731

Query: 624 EERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAK 683
            ERK    PP+       +        E     +   L+  P    + ++LGP  A + K
Sbjct: 732 AERKRFFYPPFVKNVKITSRHKEAKVAEKAAINLANLLKDIP---VKKIILGPERALIGK 788

Query: 684 RAGKFRWQLLLQ------TPN--RTLMQKILQSARPALQQLPLASKVRWSIDIDP 730
              ++ + + ++      TP   +  M KIL      L        VR+ +D+DP
Sbjct: 789 IKNQYLFDIYIKLDRAGNTPAIFKHEMGKILFE----LNTQKAFKSVRFVVDVDP 839



 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 2/112 (1%)

Query: 4   SIARVCLPVPLDKSFDYLIPAHLFPVLG--GRVQVPFGRQTLVGIVQSLTHQSDFPIEQL 61
           + A V LPVP+ + F Y IP  +   +G   RV V FGR+ ++  +    HQ      + 
Sbjct: 19  TFADVILPVPIPRMFTYRIPRTMEKSIGIGHRVIVQFGRKKVLTGIIGKVHQKPPKDYET 78

Query: 62  KSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAEL 113
           K++  VLDD PV          W +++Y   +GE    ALP  L+    +++
Sbjct: 79  KAILEVLDDQPVVNPLQIKFWFWMAEYYCCQIGEVMNAALPSGLKLSSESKI 130