Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., Primosomal protein N' from Azospirillum sp. SherDot2

 Score =  397 bits (1019), Expect = e-114
 Identities = 262/733 (35%), Positives = 384/733 (52%), Gaps = 30/733 (4%)

Query: 8   VCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKSVQAV 67
           V LP+PL +++DY +P  +  V G  V+VP G + L+G+V            +LK+V   
Sbjct: 52  VLLPLPLREAYDYRVPDGMTLVPGDFVEVPLGPRRLIGVVWG-PGAGTVESGRLKAVVRR 110

Query: 68  LDDAPVWPDKLQSLLHWCSQFYHYPLGETY--ANALPGALRKGKAAELTSHKEWRLTALG 125
            D  P+  +  +  + W + +   P G     A ++P AL   K       K        
Sbjct: 111 FDVPPM-TEVGRRFVEWVAAYTMTPPGFVLRMAVSVPSALEPPKPMLAYLRKP------- 162

Query: 126 QEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSS--TTLKALVEKGWIECEERKP 183
             +   G K    ++ ++L LL  G       L EE     T ++ L E G ++    +P
Sbjct: 163 DAEPPPGFKMTDPRK-RILALLTDGPPRTPAELAEEAGCGVTVVRGLAEAGLLDPVMLQP 221

Query: 184 VARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCF---LLEGVTGSGKTEVYLNLIT 240
                P   + +   P L+  Q  A   +  +   G +   LL+GVTGSGKTEVY   I+
Sbjct: 222 TRLGRP---DWRRPGPTLSANQQGAADDLRERVISGSYSTVLLDGVTGSGKTEVYYEAIS 278

Query: 241 PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI 300
             L +G+QALVL+PEI L+ Q ++RF +RF  P    HS L   +R + W A       +
Sbjct: 279 AALEQGKQALVLLPEIALSAQWLDRFARRFGAPPAEWHSELTGAQRRDTWRAVSKGEVPV 338

Query: 301 VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP 360
           V+G RSAL  P+  LG+IIVDEEHDS+YKQ++   YHARD+AV RAHL  +PIVL SATP
Sbjct: 339 VVGARSALFLPYPDLGVIIVDEEHDSAYKQEEGAIYHARDMAVARAHLGGLPIVLVSATP 398

Query: 361 ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVK--GLYLESGLSAPLIAEMRRHLSA 418
           +LET  NA S +Y  ++L  R G A+      +D++         L+  L   +   L+ 
Sbjct: 399 SLETKVNADSHRYARIELPSRHGGAVLPDVELVDLRRDRPPARHWLAPSLRKALTDTLAG 458

Query: 419 GNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCK 478
           G Q MLFLNRRG++P  +C  CG   +C  C A+   H+ + +++CHHCG Q+P+ H C 
Sbjct: 459 GEQAMLFLNRRGYAPLTLCRACGHRMQCPNCTAWLVEHRLARKLQCHHCGLQQPLPHACP 518

Query: 479 GCGST-QLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQIL 537
            CG    +   G G E++  ++  LFP+ R+  +  D+     +++  + +I + E  I+
Sbjct: 519 DCGEEGTMAACGPGVERIAEEVAELFPDARAAIMASDTLHGPRAIQEMVESIGRHELDII 578

Query: 538 IGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVL 597
           IGTQ++AKGHHFP +TLV ++D D  L   D RA+ER  QL  QVAGRAGR  +PG V+L
Sbjct: 579 IGTQVMAKGHHFPMLTLVGVVDADLGLNGGDLRAAERTYQLLHQVAGRAGRGERPGRVML 638

Query: 598 QTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQV 657
           QT  PEH ++QAL   D   F     E R  A +PP+  L+           VE   R  
Sbjct: 639 QTFMPEHPVMQALAAGDRDGFYQLEAEMRLEAGMPPFGRLAALIVSGEDPTLVE---RVA 695

Query: 658 RETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLP 717
               R  P  D+   +LGP PAPLA   G+ R +LL++ P  T +Q ++      L ++ 
Sbjct: 696 MALGRAAPRSDT-VHILGPAPAPLALLRGRHRRRLLMKAPRSTQVQPLIAE---WLDRVE 751

Query: 718 LASKVRWSIDIDP 730
           +   +R  ID+DP
Sbjct: 752 IPPAIRVQIDVDP 764