Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., Primosomal protein N' from Alteromonas macleodii MIT1002

 Score =  662 bits (1709), Expect = 0.0
 Identities = 362/735 (49%), Positives = 472/735 (64%), Gaps = 17/735 (2%)

Query: 7   RVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIE---QLKS 63
           +V +PVPL + F Y     L    G RV VPFG + LVG+V    H+ +  IE   +LK+
Sbjct: 5   QVAVPVPLRQLFTYTHDNALSA--GVRVVVPFGPRKLVGVVVETLHKPESDIENSNKLKA 62

Query: 64  VQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLTA 123
           +++VLDD+P+    L  +  W  Q+YH+  GE     LP  LRKG++A  T      LT 
Sbjct: 63  IESVLDDSPIIDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAAPTPQDMLMLTE 122

Query: 124 LGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKP 183
            G++     + R   +QA    +     L+ Q    ++  +  +KALVEK  I  EE  P
Sbjct: 123 EGKQTTADTLSRAPKQQACFTAMAGGALLASQAR--KQYGAPAVKALVEKSLISIEEVAP 180

Query: 184 VARP--WPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLIT 240
             +   W   L    +KP  + EQ++AIAA+N QQG F   LLEGVTGSGKTEVYL  I 
Sbjct: 181 EFKSGSWLASLSVS-EKPIPDTEQSVAIAALNRQQGNFAVSLLEGVTGSGKTEVYLQAIE 239

Query: 241 PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI 300
           P+L  G+Q L+LVPEIGLTPQT++RF +RF + V V+HS L+D ERL+ W  A+    GI
Sbjct: 240 PLLRDGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKERLHVWQRAKAGELGI 299

Query: 301 VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP 360
           +IGTRSA+ TP    G++IVDEEHD S+KQQD LRYHARD+A MRA   NIP++LGSATP
Sbjct: 300 IIGTRSAIFTPLHNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGSATP 359

Query: 361 ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN 420
           ALETL+NALSG+Y HLQLT+RAG A  T  H LD +   +  G+S  L+  MR+H++AGN
Sbjct: 360 ALETLNNALSGRYAHLQLTKRAGGAKSTHQHVLDARDQPIHYGISQGLLTIMRQHINAGN 419

Query: 421 QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC 480
           QV++F+NRRG++PAL+CH CG    C+RCD  YT H+  N ++CHHCG  R +   C+ C
Sbjct: 420 QVLVFVNRRGYAPALLCHHCGETVMCKRCDRPYTVHKAQNRLQCHHCGGMRSMPSNCEAC 479

Query: 481 GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGT 540
              +LVT G GTEQ+E  L +LFP  + VRID D+ R K  L   L AI + EYQ+L+GT
Sbjct: 480 HHNELVTAGTGTEQVEQGLASLFPGVKQVRIDSDTVRGKDKLHQTLDAINRQEYQLLVGT 539

Query: 541 QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH 600
           Q+L+KGHHFP VTLVA+LD DG+L+S+DFRA E+LAQL  Q+AGRAGRASKPGE+ LQTH
Sbjct: 540 QILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTH 599

Query: 601 HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRET 660
           +P H LLQ L+H  Y HFA  AL ERK A LPP+    + RAEA  ++    FL+  ++ 
Sbjct: 600 NPHHPLLQDLVHNGYGHFARHALMERKAAGLPPFISQFVIRAEATDSSLAYRFLQDSKQV 659

Query: 661 LRCNPWFDSECMVL-GPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLA 719
                +     + L GP P  + KR G+FR+ L+     R  +   L+ A P LQ LP A
Sbjct: 660 -----FLQQHAIELNGPFPCLIEKRQGRFRFMLVCSHEKRAPLHNALRLALPFLQALPQA 714

Query: 720 SKVRWSIDIDPQDLS 734
            KVRWSIDIDP D S
Sbjct: 715 MKVRWSIDIDPTDFS 729