Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1165 a.a., transcription-repair coupling factor from Agrobacterium fabrum C58

 Score = 58.2 bits (139), Expect = 2e-12
 Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 203 QEQAIAIAAVNSQQGFGC---FLLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLT 259
           ++Q  AI AV    G G     L+ G  G GKTEV L         G Q  V+VP   L 
Sbjct: 623 EDQLNAIEAVRDDLGAGRPMDRLICGDVGFGKTEVALRAAFLAAMNGVQVAVVVPTTLLA 682

Query: 260 PQTINRFRQRFN-VPVEVMHSA--LNDTERLNAWLAARDKVAGIVIGTRSALLT--PFAK 314
            Q    F +RF  +P+ V  ++  +   E         +    IV+GT + L     FA 
Sbjct: 683 RQHFRTFSERFRGLPIRVQQASRLVGSKELALTKKEVAEGKTDIVVGTHALLGAGISFAN 742

Query: 315 LGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
           LG++I+DEE     K ++ L+    DV V+            SATP   TL  A++G
Sbjct: 743 LGLLIIDEEQHFGVKHKERLKELKSDVHVLTL----------SATPIPRTLQLAMTG 789