Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 741 a.a., Primosomal protein N' from Acinetobacter radioresistens SK82

 Score =  601 bits (1549), Expect = e-176
 Identities = 333/735 (45%), Positives = 464/735 (63%), Gaps = 15/735 (2%)

Query: 7   RVCLPVPLDKSFDYLIPA--HLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ--LK 62
           RV +PV L  SFDYL+ A  +L   +G RV V FGRQ L+GI+         P  +  LK
Sbjct: 15  RVAVPVHLYDSFDYLLSAEQYLQAEVGARVAVSFGRQNLIGIIVEKISPDVMPDPRIKLK 74

Query: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLT 122
           ++  +LD   +   K+ SLL W +Q+Y +PLGE    ALPG LR+GK   L + + W++ 
Sbjct: 75  AITELLDKEAIIDSKVLSLLTWSAQYYQFPLGEVMQCALPGLLRQGKPLNLLA-RVWKVV 133

Query: 123 ALGQEQLMQGVKRGAVKQAQVLHLLQ-HGALSHQTLLD-EEVSSTTLKALVEKGWIECEE 180
               EQL+    + ++KQ     +L+ H A + + +L+   V + TLKAL +K  + CE 
Sbjct: 134 QPDAEQLL----KRSIKQQDAYKILKLHAAGTTEDILNLSGVETATLKALEKKEIVRCEL 189

Query: 181 RKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLIT 240
                 P P +L      P  +Q +AI    + S + F  FLL+G+TGSGKTEVYL ++ 
Sbjct: 190 TAINTTPEPVQLAQMPLTPNEDQHKAIQ-RILKSLKKFQAFLLDGLTGSGKTEVYLQVMY 248

Query: 241 PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI 300
            VL +G+Q LVLVPEIGLTPQTI+RF+ RFNV + ++HS L++++RL AW  A+   A I
Sbjct: 249 EVLKQGKQILVLVPEIGLTPQTISRFKSRFNVDIVLLHSGLSESKRLQAWQHAQTGKASI 308

Query: 301 VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP 360
           ++GTRSA+ T   +LG+II+DEEHD S+KQQ+  RYHARDVA+ RAHLEN PI+LGSATP
Sbjct: 309 ILGTRSAIYTSLPRLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATP 368

Query: 361 ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN 420
           +L++ H     K   L+L QRAGNA+  +   +D+K    + G+S  LI ++++ L    
Sbjct: 369 SLDSYHLVEQNKLTRLELNQRAGNAVLPKMQLIDLKVAKKQHGISEQLIKQIQQRLDKKE 428

Query: 421 QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYH-QHSNEMRCHHCGSQRPVLHQCKG 479
           QV++FLNRRG++P L+C+ CGW A C  CDA++T H Q  N + CHHCGS   V   C  
Sbjct: 429 QVLVFLNRRGYAPVLVCNHCGWQANCPHCDAHFTLHTQPYNHLHCHHCGSIHRVPESCPE 488

Query: 480 CGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIG 539
           C  T L T+G+GT ++E  L  LFP++  +R+DRDST R G  +     I + +  IL+G
Sbjct: 489 CQQTTLKTLGMGTAKVEETLTELFPDFDVIRVDRDSTSRVGQWDRIYQRIHQSQPAILLG 548

Query: 540 TQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQT 599
           TQMLAKGHHFP VTLVA+LD+D  L S DFRA ER AQL IQVAGRAGR  + GEV LQT
Sbjct: 549 TQMLAKGHHFPYVTLVAILDIDAGLLSFDFRAPERTAQLIIQVAGRAGRGDRRGEVYLQT 608

Query: 600 HHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRE 659
             P+H LL  L+ KDY  FA  AL ER+ AQLPPY +  L RA++ +    ++FL ++  
Sbjct: 609 LRPDHPLLTTLIEKDYRAFAKQALIERQQAQLPPYRYTVLVRADSRNQQYSQEFLAEIAR 668

Query: 660 TLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLA 719
            LR      S+  + GP PAP+ ++AG++R  L+L + +R  +   L+     + Q P  
Sbjct: 669 KLR--ELAGSQVDIWGPIPAPMERKAGRYRAHLVLLSADRAQLHFYLRQWWAMVVQQPRQ 726

Query: 720 SKVRWSIDIDPQDLS 734
            +++ SID+DPQ+LS
Sbjct: 727 HQLKLSIDVDPQELS 741