Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  220 bits (561), Expect = 3e-62
 Identities = 116/337 (34%), Positives = 206/337 (61%), Gaps = 5/337 (1%)

Query: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60
           MAT+KDVA+LAGVST TVS  +     V+ +T+++V EAV +  Y+P+++AR+L+ N ++
Sbjct: 1   MATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTR 60

Query: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120
           TI  +V    + +FSE+I G+E      GY ++L ++G    ++  ++ ++  K+ DG+L
Sbjct: 61  TIGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGIL 120

Query: 121 LLGTDLPFDVSK--PEQKNLPPMVMACEFAPELELPTVHIDNLTSA-FEAVNYLTQLGHK 177
           ++ +DL  ++       K++P +VM  ++ PE       IDN     + A  YLT  GH 
Sbjct: 121 VMCSDLTQELQDMLDAHKDIPKVVM--DWGPETSHADKIIDNSEEGGYLATKYLTDRGHT 178

Query: 178 RIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQ 237
            IA +SG    A CQ R QG+++A+  A +T+N  +   G+F  +    A  +++A+ ++
Sbjct: 179 EIACLSGHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKR 238

Query: 238 PTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGR 297
           PTA+FC NDTMA+G +   ++ G+R+P+D+SV+G+D+I+ A+Y  PPLTT+ QP+  +G+
Sbjct: 239 PTAVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGK 298

Query: 298 QAMLMMLELLRGHDVRAGSRLLETKLVVRESAAPPSK 334
            A  ++LE ++  +       +  ++V R++    +K
Sbjct: 299 NAFEILLERIKDKEHERRIFEMHPEIVERDTVKDLTK 335