Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., LacI family DNA-binding transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  242 bits (617), Expect = 1e-68
 Identities = 140/326 (42%), Positives = 193/326 (59%), Gaps = 6/326 (1%)

Query: 7   VAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIV 66
           VA+ AGVS ATVSR L     V  +TR +V  AV  +GY  N LARNLR  ES+ ++ +V
Sbjct: 6   VAEQAGVSVATVSRVLNGHSNVRPATRDKVLAAVATSGYRVNELARNLRTAESRLLLTMV 65

Query: 67  PDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDL 126
           PD+ +P+++E+IRGI+  A +HGY +LL D+G    RE S+ +L+  ++ADG + L    
Sbjct: 66  PDVGNPFYAEVIRGIDVVARQHGYFMLLCDTGADPGRERSYFDLLRRRRADGAICLD--- 122

Query: 127 PFDVSK--PEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISG 184
           P  V +   E+ N  P V  CEF   + +P V IDN  +A +AV +L   GH+RIA I+ 
Sbjct: 123 PATVQQALAEESNALPWVACCEFDSSVGVPYVGIDNYRAAGDAVRHLLARGHRRIALINS 182

Query: 185 PQHAALCQFRHQGYQQALRRAGITMNPTY-CTFGDFTFEAGAKAVRQLLALPEQPTAIFC 243
             H    Q R +GY  ALR AGI  +  +        +EAGA A   L+ L + PTA+F 
Sbjct: 183 DDHYLYAQQRQRGYLDALREAGIEPDERWRINVNSLDYEAGASAAALLMTLADAPTAVFA 242

Query: 244 HNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMM 303
            +DT+AIG I   + +G RVP D++V GFDDI  A   DPPLTTI+QP  E+G  A  ++
Sbjct: 243 VSDTLAIGVISGLRSVGKRVPDDVAVAGFDDISLAAQIDPPLTTIAQPMRELGETAARLL 302

Query: 304 LELLRGHDVRAGSRLLETKLVVRESA 329
           L+ L          LL  +LVVR+SA
Sbjct: 303 LQRLANPLENVPGVLLPHRLVVRKSA 328