Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., LacI family DNA-binding transcriptional regulator from Pectobacterium carotovorum WPP14

 Score =  180 bits (456), Expect = 5e-50
 Identities = 115/317 (36%), Positives = 166/317 (52%), Gaps = 9/317 (2%)

Query: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60
           M TM +VA+ AGVS ATVSR L    +V  +TR  V +A+ E GY PN LAR+L R  S 
Sbjct: 1   MKTMLEVARRAGVSKATVSRVLNGTGQVKQATRDAVFQAMEELGYRPNFLARSLARRTSN 60

Query: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120
           +I  ++ +   PYF  ++R   D A  HG  +++ D       E   V L+  +Q D ++
Sbjct: 61  SIGLVISNFDGPYFGRLLRRATDIAESHGKHLIVTDGHDTPEDEQRAVQLLSDRQCDAII 120

Query: 121 LLG-----TDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLG 175
           L       TDL   ++  +   +P +VM  +  P+     +      +AF+ VNYL + G
Sbjct: 121 LYTRYMSETDL---MTLLDTLTIPMIVMNRDL-PQARERCIFFRQQQAAFDVVNYLIEQG 176

Query: 176 HKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALP 235
           H+ IA I+ P      Q R  GYQQAL    I + P    +G     +G +A RQLL   
Sbjct: 177 HREIAFITAPMKTPTAQARLAGYQQALTTHQIALEPHRVAYGTSMVASGYQAARQLLDSG 236

Query: 236 EQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEI 295
              +A+F  ND MAIGA++     G ++PQD+SV GFDD   A Y  P L+T+  P  E+
Sbjct: 237 VSFSALFVSNDHMAIGAMKALYEAGKKLPQDVSVFGFDDEPCATYLHPSLSTVYMPIEEM 296

Query: 296 GRQAMLMMLELLRGHDV 312
              A+  +L+L+ G DV
Sbjct: 297 AATAITQVLDLIAGKDV 313