Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., HTH-type transcriptional repressor PurR from Escherichia coli ECRC62

 Score =  196 bits (499), Expect = 5e-55
 Identities = 114/333 (34%), Positives = 191/333 (57%), Gaps = 4/333 (1%)

Query: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60
           MAT+KDVA+ A VST TVS  +     V+  TR  V  A+ E  YSP+++AR+L+ N +K
Sbjct: 1   MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK 60

Query: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120
           +I  +       YF+EII  +E    + GY ++LG++     ++ ++++++  K+ DG+L
Sbjct: 61  SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL 120

Query: 121 LLGTDLPFDVSK--PEQKNLPPMVMACEFAPELELPTVHIDN-LTSAFEAVNYLTQLGHK 177
           ++ ++ P  +     E +++P +VM    A + +     IDN     + A  YL + GH+
Sbjct: 121 VMCSEYPEPLLAMLEEYRHIPMVVMDWGEA-KADFTDAVIDNAFEGGYMAGRYLIERGHR 179

Query: 178 RIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQ 237
            I  I GP        R  G+ +A+  A I +  ++   GDF  E+G +A++Q+L+ P +
Sbjct: 180 EIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHR 239

Query: 238 PTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGR 297
           PTA+FC  D MA+GA+  A  +GLRVPQD+S++G+D+++ A+Y  P LTTI QP+  +G 
Sbjct: 240 PTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGE 299

Query: 298 QAMLMMLELLRGHDVRAGSRLLETKLVVRESAA 330
            A  M+L+ +        S  +  +L+ R S A
Sbjct: 300 TAFNMLLDRIVNKREEPQSIEVHPRLIERRSVA 332