Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  446 bits (1148), Expect = e-130
 Identities = 214/327 (65%), Positives = 268/327 (81%)

Query: 2   ATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKT 61
           ATMKDVA  A VSTATVSRALMNP+KVS +TR RVE+A  E GY P  + RN++RNES+T
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 62  IVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLL 121
           I+ IVPDICDP+FSEIIRGIE  A  HGYLVL+GD   Q ++E +F++L+ TKQ DGMLL
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 122 LGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQ 181
           LG+ LPFD S  EQ+NLPPMVMA EFAPELELPTVHIDNLT+AF+AVNYL + GHKRI  
Sbjct: 130 LGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGC 189

Query: 182 ISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241
           I+GP+   LC +R QGY QALRR GI ++P Y   GDFTFEAG+KA++QLL LP+ PTA+
Sbjct: 190 IAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAV 249

Query: 242 FCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAML 301
           FCH+D MA+GA+ +AKR GL+VP+DLS++GFD+I   Q+CDPPLTTI+QPRYEIGR+AML
Sbjct: 250 FCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAML 309

Query: 302 MMLELLRGHDVRAGSRLLETKLVVRES 328
           ++L+ ++G  V +GSRL++ +L++R S
Sbjct: 310 LLLDQMQGQHVGSGSRLMDCELIIRGS 336