Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., Galactose operon repressor from Alteromonas macleodii MIT1002

 Score =  177 bits (448), Expect = 4e-49
 Identities = 109/328 (33%), Positives = 168/328 (51%), Gaps = 1/328 (0%)

Query: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60
           M T+  VA+ AGVS +TVSR L     V+   ++RVE+AV E  Y PNS+AR+L  N + 
Sbjct: 1   MPTIYQVAERAGVSLSTVSRVLNGKASVNKVLKERVEKAVKELNYRPNSVARSLANNRTD 60

Query: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120
           ++  +VP++  P+F ++++ +E         V++         E   V  + ++  D ++
Sbjct: 61  SVGVLVPELNAPFFGDLMQAVESTLRAADKHVIISVGRNCLETEKDAVEFLISRNCDALI 120

Query: 121 LLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIA 180
           +    L  +      ++  P+ +       L      +DN    + A  +L +LGHK IA
Sbjct: 121 MHAEALSDEYLLELNQSKLPVALVNRQVEGLPEACTSLDNEKGGYLATRHLLELGHKDIA 180

Query: 181 QISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA 240
            ISGP        R +G+++AL  AG+  NP     GD++ E G   + +L+A     TA
Sbjct: 181 YISGPTDKCDASLRLEGHKRALSEAGLPTNPQLIFNGDYSEEDGKIGLLELMARDVPFTA 240

Query: 241 IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAM 300
           + C ND MA GAI  A+ LG+ +P DLSVVGFDD+ FA +  P LTT+S P  E+   + 
Sbjct: 241 LVCANDWMASGAISCARDLGMSLPHDLSVVGFDDVVFAHHVFPRLTTVSNPIAEMAEMSA 300

Query: 301 LMMLELLRGHDVRAGSRLLETKLVVRES 328
             +L  + G          E  LVVRES
Sbjct: 301 KYILNKVYG-QANNVQLYFEPSLVVRES 327