Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  266 bits (681), Expect = 4e-76
 Identities = 146/330 (44%), Positives = 212/330 (64%), Gaps = 2/330 (0%)

Query: 2   ATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKT 61
           + +++VA LAGVS ATVSRAL  P+KV   TRK+V +AV +A + PN+ A + RR  + T
Sbjct: 7   SNIREVAALAGVSIATVSRALQQPDKVRPETRKKVFDAVRQANFVPNAQAASFRRQSNNT 66

Query: 62  IVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLL 121
           ++ +V DI +P++ EI +G+E+AA E G+ VL+GD+   + R  + +++V  K ADG++L
Sbjct: 67  VILLVRDIGNPFYLEIYKGVEEAAGEAGFKVLMGDARNDEHRVATHIDMVRQKHADGLIL 126

Query: 122 LGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQ 181
           +    P ++   +   LPP+V+A E  P L LPTV +DN  ++  A+ +L   GH+RI  
Sbjct: 127 MTGQFPSELLD-QADALPPIVIASETVPGLALPTVKVDNRAASMNAMRHLIAAGHQRIVH 185

Query: 182 ISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241
           ++GP   +L Q R  GY+ AL  AGI         GD++ EAG +A+  LL      TAI
Sbjct: 186 LAGPVPESLAQERFDGYRAALAEAGIAYADELVVTGDYSIEAGRQAIAGLLEGGIAFTAI 245

Query: 242 FCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAML 301
           F  +D MAIGAI E +  GL VP D+SV+GFDDI FA   +PPLTT+ QPR E+GR+AM 
Sbjct: 246 FASSDQMAIGAISELRGRGLSVPADVSVIGFDDIIFANAFEPPLTTVRQPRQEMGRRAMA 305

Query: 302 MMLELLRGHDVRAGSRLLETKLVVRESAAP 331
           +M++ L G    A + +L+T+LVVR S AP
Sbjct: 306 LMVDRLNGKRT-AETIVLDTELVVRGSVAP 334