Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score =  175 bits (444), Expect = 3e-48
 Identities = 118/414 (28%), Positives = 204/414 (49%), Gaps = 6/414 (1%)

Query: 38  GLVAILMFNLVDTFFISLLGT-QALAAISYTFPVTFAVNCITMGIGVGLSTCIGRLLGQG 96
           GL+A+   +L++ F+ISLLG  +  AA+ +   V F    + +G+ +G++  + R +G G
Sbjct: 34  GLIAVFAVDLINLFYISLLGEKETAAAVGFAGVVGFFHASLCIGLTIGIAAVVSRTVGAG 93

Query: 97  DGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYLTIP 156
               A R+ +  L+L + L   A T     + P    LGA  E   L   Y+ V   T+P
Sbjct: 94  RMDDARRIGTSSLVLMVALSVLAGTGTAFFLHPALQALGAQGETARLAHRYLSVTVHTLP 153

Query: 157 LLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIASAF 216
           LL + MA ++ +R+ GD +    + +    +   LDP+LIFG+G    LG+ GAAI++  
Sbjct: 154 LLGIGMATSALLRSVGDARRSMTVTLAGAFVTAVLDPILIFGFG----LGLDGAAISAVV 209

Query: 217 SWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILKIGTPAALSTAMNPISGALLMIML 276
           S        L+ ++ + ++L       L  D + +  +  PA L+    P+  A +   +
Sbjct: 210 SRTALAALGLHGVLVKHRMLGPFQASRLGADARALGSVAGPAVLTNLATPVGAAFVTHAV 269

Query: 277 SSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFLSLRFSL 336
           +  G +AVA      R+  +   ++ +L+ A+ P +AQNLGA    R   GL  SL F +
Sbjct: 270 AQFGPSAVAGAATIDRLTPVAFGLVYALSGAVGPILAQNLGAGQYRRVQEGLRASLLFMV 329

Query: 337 LFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQGVVMMLVSALNALHQ 396
               + ++++      L   FS E    +L+  +   +  S+ F G + +  ++ N L  
Sbjct: 330 ASVAVAWLLLALGQGLLVRAFSAEGQAAELISLFCSWLAASFFFAGGLFVANASFNNLGH 389

Query: 397 PLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIAVGNILGGLLGYLYALRL 450
           PL +  +++ R  + T+P AW G   Y   G+ IG AVG+ + GLL  + A RL
Sbjct: 390 PLLSTGFNWGRATLGTIPFAWWGSH-YGAAGVLIGQAVGSSIFGLLAVVVAFRL 442