Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score =  125 bits (314), Expect = 3e-33
 Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 8/419 (1%)

Query: 23  PIPLVLRQMTVPMIFGLVAILMFNLVDTFFIS-LLGTQALAAISYTFPVTFAVNCITMGI 81
           P+  V      PM+   +   +   ++  ++  +LG  ALAA+S  FPV F      +G+
Sbjct: 29  PLWKVFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVMFFFIAFIIGL 88

Query: 82  GVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELI 141
           G G S  IG+  G  D  +A  V+   L + +L     +  G     P+   LG   +++
Sbjct: 89  GAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPPDVL 148

Query: 142 PLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGP 201
                Y  +  + +P L + +   + +R  GDT TP   +M++ LI   + P LI G+G 
Sbjct: 149 ADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRGWGG 208

Query: 202 FPELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQ------ILKIG 255
            P+LG+   A AS  S+  A I   + L +R+  LA P    +R+   Q      +LKIG
Sbjct: 209 LPQLGVASGAWASVLSFTVATIWLGFRLRQRKSPLA-PDAEFMRNLRIQPQLLKAVLKIG 267

Query: 256 TPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQN 315
            P  +   +  ++  +L+ M++S+G++A AAYGA  ++ + +    +S+    +   AQ 
Sbjct: 268 VPTGVQMIVVALAEVVLLSMVNSYGSSATAAYGAVNQVVAYVQFPAISIAITASILGAQA 327

Query: 316 LGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVP 375
           +GA    R  A    +L  +++    + ++    S  L A F   + V ++    L ++ 
Sbjct: 328 IGAGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFITSEPVLEIAQTLLHIML 387

Query: 376 VSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIAV 434
            S    G+   L   + A    L     S + +    +P A+       ++G++I   V
Sbjct: 388 WSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIWIAYPV 446